Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.26□□□□□ -0.45
Trim63Q38HM4 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.26□□□□□ -0.45
Trim63Q38HM4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.26□□□□□ -0.45
Trim63Q38HM4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Gm6139-201ENSMUST00000079261 882 ntBASIC12.26□□□□□ -0.45
Trim63Q38HM4 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.26□□□□□ -0.45
Trim63Q38HM4 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.25□□□□□ -0.45
Trim63Q38HM4 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim63Q38HM4 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Gm37025-201ENSMUST00000195159 829 ntBASIC12.25□□□□□ -0.45
Trim63Q38HM4 Appbp2os-202ENSMUST00000206972 447 ntBASIC12.25□□□□□ -0.45
Trim63Q38HM4 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.25□□□□□ -0.45
Trim63Q38HM4 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim63Q38HM4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim63Q38HM4 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.25□□□□□ -0.45
Trim63Q38HM4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.25□□□□□ -0.45
Trim63Q38HM4 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim63Q38HM4 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim63Q38HM4 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Gm13234-201ENSMUST00000120010 747 ntBASIC12.24□□□□□ -0.45
Trim63Q38HM4 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim63Q38HM4 Gm18958-201ENSMUST00000174258 762 ntBASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms