Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Mir3060-201ENSMUST00000175339 83 ntBASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Gm17795-201ENSMUST00000214505 757 ntBASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Gm18473-201ENSMUST00000220543 868 ntBASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Gm26927-201ENSMUST00000182385 965 ntBASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Gm5425-201ENSMUST00000214125 459 ntBASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Gm33320-201ENSMUST00000192232 530 ntBASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Gm18905-201ENSMUST00000205454 928 ntBASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Gm25545-201ENSMUST00000122673 323 ntBASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Gm7600-201ENSMUST00000209657 785 ntBASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 AC123857.2-201ENSMUST00000225756 1582 ntBASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Gm15593-201ENSMUST00000122085 1008 ntBASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ush2AQ2QI47 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC7.71□□□□□ -1.17
Ush2AQ2QI47 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ush2AQ2QI47 Gm11340-201ENSMUST00000119226 412 ntBASIC7.71□□□□□ -1.17
Ush2AQ2QI47 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC7.71□□□□□ -1.17
Ush2AQ2QI47 Gm26464-201ENSMUST00000157094 305 ntBASIC7.71□□□□□ -1.17
Ush2AQ2QI47 Gm37905-201ENSMUST00000195310 341 ntBASIC7.71□□□□□ -1.17
Ush2AQ2QI47 AC153872.1-201ENSMUST00000199539 128 ntBASIC7.71□□□□□ -1.17
Ush2AQ2QI47 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ush2AQ2QI47 AC156501.1-201ENSMUST00000228219 270 ntBASIC7.71□□□□□ -1.17
Ush2AQ2QI47 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ush2AQ2QI47 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
Ush2AQ2QI47 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Ush2AQ2QI47 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Ush2AQ2QI47 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ush2AQ2QI47 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ush2AQ2QI47 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ush2AQ2QI47 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ush2AQ2QI47 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ush2AQ2QI47 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ush2AQ2QI47 Gm4986-201ENSMUST00000119731 549 ntBASIC7.71□□□□□ -1.17
Ush2AQ2QI47 Gm5070-201ENSMUST00000177599 862 ntBASIC7.71□□□□□ -1.17
Ush2AQ2QI47 Gm6222-202ENSMUST00000182143 629 ntBASIC7.71□□□□□ -1.17
Ush2AQ2QI47 Gm45098-201ENSMUST00000207179 657 ntBASIC7.71□□□□□ -1.17
Ush2AQ2QI47 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms