Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc4Q08624 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc4Q08624 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc4Q08624 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc4Q08624 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc4Q08624 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc4Q08624 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc4Q08624 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.22□□□□□ -0.13
Hoxc4Q08624 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc4Q08624 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc4Q08624 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc4Q08624 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc4Q08624 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.22□□□□□ -0.13
Hoxc4Q08624 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.22□□□□□ -0.13
Hoxc4Q08624 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc4Q08624 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Hoxc4Q08624 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc4Q08624 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc4Q08624 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc4Q08624 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc4Q08624 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hoxc4Q08624 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc4Q08624 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc4Q08624 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc4Q08624 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc4Q08624 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hoxc4Q08624 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Hoxc4Q08624 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc4Q08624 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc4Q08624 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc4Q08624 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc4Q08624 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc4Q08624 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc4Q08624 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc4Q08624 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.21□□□□□ -0.13
Hoxc4Q08624 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc4Q08624 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc4Q08624 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc4Q08624 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.21□□□□□ -0.13
Hoxc4Q08624 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.21□□□□□ -0.13
Hoxc4Q08624 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc4Q08624 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc4Q08624 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc4Q08624 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc4Q08624 Gm24543-201ENSMUST00000103867 82 ntBASIC14.21□□□□□ -0.13
Hoxc4Q08624 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Hoxc4Q08624 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc4Q08624 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.21□□□□□ -0.13
Hoxc4Q08624 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.21□□□□□ -0.13
Hoxc4Q08624 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.21□□□□□ -0.13
Hoxc4Q08624 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc4Q08624 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.21□□□□□ -0.13
Hoxc4Q08624 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.21□□□□□ -0.13
Hoxc4Q08624 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.21□□□□□ -0.13
Hoxc4Q08624 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc4Q08624 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc4Q08624 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc4Q08624 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc4Q08624 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc4Q08624 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc4Q08624 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc4Q08624 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxc4Q08624 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxc4Q08624 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxc4Q08624 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxc4Q08624 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.2□□□□□ -0.14
Hoxc4Q08624 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.2□□□□□ -0.14
Hoxc4Q08624 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Mir8102-201ENSMUST00000184148 139 ntBASIC14.2□□□□□ -0.14
Hoxc4Q08624 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Hoxc4Q08624 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms