Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf4Q06507 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.19□□□□□ -0.14
Atf4Q06507 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf4Q06507 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf4Q06507 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Atf4Q06507 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atf4Q06507 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf4Q06507 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf4Q06507 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf4Q06507 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Atf4Q06507 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf4Q06507 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf4Q06507 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.18□□□□□ -0.14
Atf4Q06507 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.18□□□□□ -0.14
Atf4Q06507 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Atf4Q06507 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf4Q06507 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Atf4Q06507 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.18□□□□□ -0.14
Atf4Q06507 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Atf4Q06507 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf4Q06507 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf4Q06507 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf4Q06507 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf4Q06507 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Atf4Q06507 Gm12813-201ENSMUST00000119615 902 ntBASIC14.18□□□□□ -0.14
Atf4Q06507 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf4Q06507 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.18□□□□□ -0.14
Atf4Q06507 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Atf4Q06507 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf4Q06507 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.18□□□□□ -0.14
Atf4Q06507 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf4Q06507 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Atf4Q06507 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf4Q06507 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.18□□□□□ -0.14
Atf4Q06507 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Atf4Q06507 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Atf4Q06507 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf4Q06507 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Atf4Q06507 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Atf4Q06507 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Atf4Q06507 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atf4Q06507 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf4Q06507 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atf4Q06507 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf4Q06507 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf4Q06507 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.17□□□□□ -0.14
Atf4Q06507 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf4Q06507 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Atf4Q06507 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Atf4Q06507 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf4Q06507 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf4Q06507 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.17□□□□□ -0.14
Atf4Q06507 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf4Q06507 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Atf4Q06507 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf4Q06507 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Atf4Q06507 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.17□□□□□ -0.14
Atf4Q06507 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atf4Q06507 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atf4Q06507 Gm25948-201ENSMUST00000175334 112 ntBASIC14.17□□□□□ -0.14
Atf4Q06507 Gm43474-201ENSMUST00000196415 774 ntBASIC14.17□□□□□ -0.14
Atf4Q06507 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.17□□□□□ -0.14
Atf4Q06507 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC14.17□□□□□ -0.14
Atf4Q06507 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.17□□□□□ -0.14
Atf4Q06507 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC14.17□□□□□ -0.14
Atf4Q06507 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf4Q06507 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf4Q06507 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf4Q06507 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf4Q06507 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf4Q06507 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Atf4Q06507 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atf4Q06507 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf4Q06507 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf4Q06507 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf4Q06507 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf4Q06507 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atf4Q06507 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf4Q06507 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf4Q06507 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf4Q06507 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf4Q06507 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf4Q06507 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Atf4Q06507 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf4Q06507 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.16□□□□□ -0.14
Atf4Q06507 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atf4Q06507 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Atf4Q06507 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atf4Q06507 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.16□□□□□ -0.14
Atf4Q06507 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atf4Q06507 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atf4Q06507 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atf4Q06507 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atf4Q06507 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atf4Q06507 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Atf4Q06507 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.16□□□□□ -0.14
Atf4Q06507 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.16□□□□□ -0.14
Atf4Q06507 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atf4Q06507 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Atf4Q06507 Gm15968-201ENSMUST00000119342 1168 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms