Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcr5Q04683 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcr5Q04683 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcr5Q04683 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcr5Q04683 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcr5Q04683 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcr5Q04683 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.15□□□□□ -0.14
Cxcr5Q04683 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcr5Q04683 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcr5Q04683 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcr5Q04683 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcr5Q04683 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcr5Q04683 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Cxcr5Q04683 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcr5Q04683 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcr5Q04683 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcr5Q04683 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcr5Q04683 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcr5Q04683 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cxcr5Q04683 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcr5Q04683 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcr5Q04683 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cxcr5Q04683 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcr5Q04683 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcr5Q04683 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcr5Q04683 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.14□□□□□ -0.15
Cxcr5Q04683 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcr5Q04683 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cxcr5Q04683 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcr5Q04683 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcr5Q04683 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.14□□□□□ -0.15
Cxcr5Q04683 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Cxcr5Q04683 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.14□□□□□ -0.15
Cxcr5Q04683 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcr5Q04683 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcr5Q04683 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcr5Q04683 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cxcr5Q04683 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcr5Q04683 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcr5Q04683 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.14□□□□□ -0.15
Cxcr5Q04683 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.14□□□□□ -0.15
Cxcr5Q04683 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.14□□□□□ -0.15
Cxcr5Q04683 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Cxcr5Q04683 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr5Q04683 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Cxcr5Q04683 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr5Q04683 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr5Q04683 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr5Q04683 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.13□□□□□ -0.15
Cxcr5Q04683 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr5Q04683 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.13□□□□□ -0.15
Cxcr5Q04683 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Cxcr5Q04683 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.13□□□□□ -0.15
Cxcr5Q04683 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cxcr5Q04683 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.13□□□□□ -0.15
Cxcr5Q04683 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.13□□□□□ -0.15
Cxcr5Q04683 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.13□□□□□ -0.15
Cxcr5Q04683 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.13□□□□□ -0.15
Cxcr5Q04683 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr5Q04683 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.13□□□□□ -0.15
Cxcr5Q04683 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr5Q04683 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cxcr5Q04683 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr5Q04683 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cxcr5Q04683 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr5Q04683 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cxcr5Q04683 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr5Q04683 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr5Q04683 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcr5Q04683 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr5Q04683 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr5Q04683 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr5Q04683 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr5Q04683 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr5Q04683 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr5Q04683 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr5Q04683 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr5Q04683 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr5Q04683 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr5Q04683 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr5Q04683 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr5Q04683 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr5Q04683 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr5Q04683 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr5Q04683 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cxcr5Q04683 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr5Q04683 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr5Q04683 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.12□□□□□ -0.15
Cxcr5Q04683 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr5Q04683 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr5Q04683 Gm37153-201ENSMUST00000193637 231 ntBASIC14.12□□□□□ -0.15
Cxcr5Q04683 Gm9682-201ENSMUST00000197505 556 ntBASIC14.12□□□□□ -0.15
Cxcr5Q04683 Gm18669-201ENSMUST00000216049 778 ntBASIC14.12□□□□□ -0.15
Cxcr5Q04683 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.12□□□□□ -0.15
Cxcr5Q04683 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr5Q04683 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr5Q04683 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr5Q04683 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr5Q04683 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcr5Q04683 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms