Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Xrn1P97789 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Xrn1P97789 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Xrn1P97789 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC20.79■□□□□ 0.92
Xrn1P97789 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Xrn1P97789 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Xrn1P97789 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Xrn1P97789 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Xrn1P97789 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Xrn1P97789 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Xrn1P97789 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Xrn1P97789 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Xrn1P97789 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Xrn1P97789 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Xrn1P97789 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC20.78■□□□□ 0.92
Xrn1P97789 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC20.78■□□□□ 0.92
Xrn1P97789 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Xrn1P97789 Mir1982-201ENSMUST00000157368 74 ntBASIC20.78■□□□□ 0.92
Xrn1P97789 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Xrn1P97789 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC20.78■□□□□ 0.92
Xrn1P97789 AC155258.1-201ENSMUST00000219303 253 ntBASIC20.78■□□□□ 0.92
Xrn1P97789 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Xrn1P97789 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Xrn1P97789 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Xrn1P97789 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Xrn1P97789 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Xrn1P97789 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Xrn1P97789 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Xrn1P97789 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Xrn1P97789 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Xrn1P97789 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Xrn1P97789 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Xrn1P97789 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Xrn1P97789 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Xrn1P97789 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
Xrn1P97789 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Xrn1P97789 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Xrn1P97789 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Xrn1P97789 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Xrn1P97789 Gm12416-201ENSMUST00000120911 1008 ntBASIC20.78■□□□□ 0.92
Xrn1P97789 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC20.78■□□□□ 0.92
Xrn1P97789 Gm17420-201ENSMUST00000164753 153 ntBASIC20.78■□□□□ 0.92
Xrn1P97789 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Xrn1P97789 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Xrn1P97789 AC155729.1-201ENSMUST00000227758 544 ntBASIC20.78■□□□□ 0.92
Xrn1P97789 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Xrn1P97789 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Xrn1P97789 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Xrn1P97789 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Xrn1P97789 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Xrn1P97789 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Xrn1P97789 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Xrn1P97789 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Xrn1P97789 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Xrn1P97789 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Xrn1P97789 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC20.77■□□□□ 0.92
Xrn1P97789 Gm44799-201ENSMUST00000207639 1202 ntBASIC20.77■□□□□ 0.92
Xrn1P97789 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC20.77■□□□□ 0.92
Xrn1P97789 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Xrn1P97789 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Xrn1P97789 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Xrn1P97789 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Xrn1P97789 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Xrn1P97789 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Xrn1P97789 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Xrn1P97789 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Xrn1P97789 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Xrn1P97789 Gm13689-201ENSMUST00000119360 685 ntBASIC20.76■□□□□ 0.91
Xrn1P97789 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC20.76■□□□□ 0.91
Xrn1P97789 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Xrn1P97789 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Xrn1P97789 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Xrn1P97789 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Xrn1P97789 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC20.76■□□□□ 0.91
Xrn1P97789 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Xrn1P97789 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Xrn1P97789 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Xrn1P97789 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Xrn1P97789 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Xrn1P97789 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Xrn1P97789 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Xrn1P97789 AL645783.1-201ENSMUST00000221416 1832 ntBASIC20.76■□□□□ 0.91
Xrn1P97789 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Xrn1P97789 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC20.76■□□□□ 0.91
Xrn1P97789 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Xrn1P97789 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Xrn1P97789 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Xrn1P97789 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC20.75■□□□□ 0.91
Xrn1P97789 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Xrn1P97789 AC156560.2-201ENSMUST00000221232 264 ntBASIC20.75■□□□□ 0.91
Xrn1P97789 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Xrn1P97789 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Xrn1P97789 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Xrn1P97789 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Xrn1P97789 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Xrn1P97789 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Xrn1P97789 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Xrn1P97789 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Xrn1P97789 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Xrn1P97789 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms