Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1aP97445 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1aP97445 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Cacna1aP97445 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1aP97445 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1aP97445 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cacna1aP97445 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1aP97445 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1aP97445 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacna1aP97445 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cacna1aP97445 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1aP97445 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1aP97445 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1aP97445 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1aP97445 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1aP97445 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.68□□□□□ -0.22
Cacna1aP97445 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1aP97445 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.68□□□□□ -0.22
Cacna1aP97445 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cacna1aP97445 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1aP97445 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cacna1aP97445 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cacna1aP97445 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cacna1aP97445 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1aP97445 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1aP97445 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1aP97445 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cacna1aP97445 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.68□□□□□ -0.22
Cacna1aP97445 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1aP97445 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1aP97445 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1aP97445 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Cacna1aP97445 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1aP97445 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1aP97445 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1aP97445 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1aP97445 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Cacna1aP97445 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1aP97445 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1aP97445 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1aP97445 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacna1aP97445 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cacna1aP97445 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.67□□□□□ -0.22
Cacna1aP97445 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Cacna1aP97445 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cacna1aP97445 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.67□□□□□ -0.22
Cacna1aP97445 Gm17150-201ENSMUST00000165577 381 ntBASIC13.67□□□□□ -0.22
Cacna1aP97445 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.67□□□□□ -0.22
Cacna1aP97445 Dupd1-202ENSMUST00000224735 548 ntBASIC13.67□□□□□ -0.22
Cacna1aP97445 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cacna1aP97445 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.67□□□□□ -0.22
Cacna1aP97445 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.67□□□□□ -0.22
Cacna1aP97445 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.67□□□□□ -0.22
Cacna1aP97445 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cacna1aP97445 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cacna1aP97445 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1aP97445 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.66□□□□□ -0.22
Cacna1aP97445 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1aP97445 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
Cacna1aP97445 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1aP97445 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1aP97445 Gm14042-201ENSMUST00000120139 833 ntBASIC13.66□□□□□ -0.22
Cacna1aP97445 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cacna1aP97445 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1aP97445 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1aP97445 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1aP97445 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1aP97445 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1aP97445 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms