Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PrkdcP97313 Gm6283-201ENSMUST00000182369 1000 ntBASIC9.94□□□□□ -0.82
PrkdcP97313 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC9.94□□□□□ -0.82
PrkdcP97313 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PrkdcP97313 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PrkdcP97313 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
PrkdcP97313 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
PrkdcP97313 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC9.94□□□□□ -0.82
PrkdcP97313 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC9.94□□□□□ -0.82
PrkdcP97313 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC9.94□□□□□ -0.82
PrkdcP97313 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
PrkdcP97313 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
PrkdcP97313 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PrkdcP97313 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PrkdcP97313 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PrkdcP97313 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
PrkdcP97313 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PrkdcP97313 Gm21038-201ENSMUST00000222205 1383 ntBASIC9.94□□□□□ -0.82
PrkdcP97313 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
PrkdcP97313 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
PrkdcP97313 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PrkdcP97313 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
PrkdcP97313 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PrkdcP97313 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
PrkdcP97313 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC9.93□□□□□ -0.82
PrkdcP97313 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC9.93□□□□□ -0.82
PrkdcP97313 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC9.93□□□□□ -0.82
PrkdcP97313 Olfr284-202ENSMUST00000206647 966 ntBASIC9.93□□□□□ -0.82
PrkdcP97313 Gm5425-201ENSMUST00000214125 459 ntBASIC9.93□□□□□ -0.82
PrkdcP97313 Gm6983-201ENSMUST00000214912 628 ntBASIC9.93□□□□□ -0.82
PrkdcP97313 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
PrkdcP97313 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
PrkdcP97313 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
PrkdcP97313 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
PrkdcP97313 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
PrkdcP97313 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PrkdcP97313 App-207ENSMUST00000227737 2827 ntBASIC9.93□□□□□ -0.82
PrkdcP97313 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
PrkdcP97313 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
PrkdcP97313 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
PrkdcP97313 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
PrkdcP97313 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC9.93□□□□□ -0.82
PrkdcP97313 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
PrkdcP97313 Gm44364-201ENSMUST00000198368 141 ntBASIC9.93□□□□□ -0.82
PrkdcP97313 Olfr286-202ENSMUST00000205305 969 ntBASIC9.93□□□□□ -0.82
PrkdcP97313 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PrkdcP97313 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PrkdcP97313 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PrkdcP97313 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PrkdcP97313 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
PrkdcP97313 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC9.93□□□□□ -0.82
PrkdcP97313 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
PrkdcP97313 Gm24514-201ENSMUST00000174961 285 ntBASIC9.93□□□□□ -0.82
PrkdcP97313 Gm18935-201ENSMUST00000212692 664 ntBASIC9.93□□□□□ -0.82
PrkdcP97313 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
PrkdcP97313 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PrkdcP97313 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC9.93□□□□□ -0.82
PrkdcP97313 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
PrkdcP97313 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PrkdcP97313 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC9.93□□□□□ -0.82
PrkdcP97313 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
PrkdcP97313 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PrkdcP97313 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PrkdcP97313 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
PrkdcP97313 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC9.93□□□□□ -0.82
PrkdcP97313 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
PrkdcP97313 Gm8213-201ENSMUST00000118191 441 ntBASIC9.92□□□□□ -0.82
PrkdcP97313 Gm13612-201ENSMUST00000119276 390 ntBASIC9.92□□□□□ -0.82
PrkdcP97313 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC9.92□□□□□ -0.82
PrkdcP97313 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
PrkdcP97313 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
PrkdcP97313 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PrkdcP97313 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
PrkdcP97313 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
PrkdcP97313 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
PrkdcP97313 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
PrkdcP97313 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
PrkdcP97313 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PrkdcP97313 Gm14381-201ENSMUST00000122105 414 ntBASIC9.92□□□□□ -0.82
PrkdcP97313 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
PrkdcP97313 Gm8810-201ENSMUST00000172895 754 ntBASIC9.92□□□□□ -0.82
PrkdcP97313 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
PrkdcP97313 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC9.92□□□□□ -0.82
PrkdcP97313 Gm9368-201ENSMUST00000219348 831 ntBASIC9.92□□□□□ -0.82
PrkdcP97313 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
PrkdcP97313 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
PrkdcP97313 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PrkdcP97313 Gm38037-201ENSMUST00000192600 1624 ntBASIC9.92□□□□□ -0.82
PrkdcP97313 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
PrkdcP97313 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
PrkdcP97313 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PrkdcP97313 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
PrkdcP97313 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PrkdcP97313 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC9.92□□□□□ -0.82
PrkdcP97313 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PrkdcP97313 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PrkdcP97313 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PrkdcP97313 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
PrkdcP97313 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PrkdcP97313 Gm8566-201ENSMUST00000120174 465 ntBASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms