Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Usp9xP70398 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Usp9xP70398 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Usp9xP70398 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Usp9xP70398 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Usp9xP70398 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.23□□□□□ -0.45
Usp9xP70398 Gm13350-201ENSMUST00000120519 479 ntBASIC12.23□□□□□ -0.45
Usp9xP70398 Gm16570-201ENSMUST00000161951 436 ntBASIC12.23□□□□□ -0.45
Usp9xP70398 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.23□□□□□ -0.45
Usp9xP70398 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.23□□□□□ -0.45
Usp9xP70398 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Usp9xP70398 Gm8463-201ENSMUST00000208573 613 ntBASIC12.23□□□□□ -0.45
Usp9xP70398 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.23□□□□□ -0.45
Usp9xP70398 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Usp9xP70398 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.23□□□□□ -0.45
Usp9xP70398 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.23□□□□□ -0.45
Usp9xP70398 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Usp9xP70398 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 Mir125a-201ENSMUST00000083545 68 ntBASIC12.23□□□□□ -0.45
Usp9xP70398 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp9xP70398 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.22□□□□□ -0.45
Usp9xP70398 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp9xP70398 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.22□□□□□ -0.45
Usp9xP70398 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Usp9xP70398 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usp9xP70398 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp9xP70398 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp9xP70398 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp9xP70398 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp9xP70398 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.22□□□□□ -0.45
Usp9xP70398 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp9xP70398 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp9xP70398 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Usp9xP70398 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.22□□□□□ -0.45
Usp9xP70398 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.22□□□□□ -0.45
Usp9xP70398 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.22□□□□□ -0.45
Usp9xP70398 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.22□□□□□ -0.45
Usp9xP70398 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp9xP70398 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Usp9xP70398 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp9xP70398 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp9xP70398 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Usp9xP70398 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usp9xP70398 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp9xP70398 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.22□□□□□ -0.45
Usp9xP70398 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.22□□□□□ -0.45
Usp9xP70398 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Usp9xP70398 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp9xP70398 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp9xP70398 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.22□□□□□ -0.45
Usp9xP70398 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp9xP70398 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp9xP70398 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp9xP70398 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp9xP70398 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usp9xP70398 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp9xP70398 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp9xP70398 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp9xP70398 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Usp9xP70398 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Usp9xP70398 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp9xP70398 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp9xP70398 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.21□□□□□ -0.45
Usp9xP70398 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp9xP70398 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp9xP70398 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms