Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Stra8P70278 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Stra8P70278 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Stra8P70278 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Stra8P70278 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Stra8P70278 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC20.52■□□□□ 0.88
Stra8P70278 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Stra8P70278 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Stra8P70278 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Stra8P70278 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Stra8P70278 Gm27741-201ENSMUST00000185060 237 ntBASIC20.52■□□□□ 0.88
Stra8P70278 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC20.52■□□□□ 0.88
Stra8P70278 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC20.52■□□□□ 0.88
Stra8P70278 Gm37584-201ENSMUST00000193595 1290 ntBASIC20.52■□□□□ 0.88
Stra8P70278 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Stra8P70278 Gm6376-201ENSMUST00000209407 580 ntBASIC20.52■□□□□ 0.88
Stra8P70278 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Stra8P70278 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Stra8P70278 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Stra8P70278 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Stra8P70278 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Stra8P70278 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Stra8P70278 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Stra8P70278 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC20.52■□□□□ 0.88
Stra8P70278 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC20.52■□□□□ 0.88
Stra8P70278 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Stra8P70278 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Stra8P70278 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Stra8P70278 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Stra8P70278 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Stra8P70278 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Stra8P70278 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Stra8P70278 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Stra8P70278 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Stra8P70278 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Stra8P70278 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Stra8P70278 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Stra8P70278 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Stra8P70278 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Stra8P70278 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC20.51■□□□□ 0.87
Stra8P70278 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Stra8P70278 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Stra8P70278 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Stra8P70278 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC20.51■□□□□ 0.87
Stra8P70278 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Stra8P70278 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Stra8P70278 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Stra8P70278 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Stra8P70278 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Stra8P70278 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Stra8P70278 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Stra8P70278 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Stra8P70278 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Stra8P70278 Gm43205-201ENSMUST00000198622 1968 ntBASIC20.5■□□□□ 0.87
Stra8P70278 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Stra8P70278 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Stra8P70278 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Stra8P70278 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Stra8P70278 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC20.5■□□□□ 0.87
Stra8P70278 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Stra8P70278 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Stra8P70278 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Stra8P70278 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Stra8P70278 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Stra8P70278 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Stra8P70278 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20.5■□□□□ 0.87
Stra8P70278 Gm13418-201ENSMUST00000119097 944 ntBASIC20.5■□□□□ 0.87
Stra8P70278 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Stra8P70278 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Stra8P70278 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Stra8P70278 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Stra8P70278 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Stra8P70278 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Stra8P70278 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Stra8P70278 Gm18856-201ENSMUST00000178096 1374 ntBASIC20.49■□□□□ 0.87
Stra8P70278 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Stra8P70278 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Stra8P70278 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Stra8P70278 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Stra8P70278 Gm8344-201ENSMUST00000119813 856 ntBASIC20.49■□□□□ 0.87
Stra8P70278 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Stra8P70278 Gm4535-201ENSMUST00000182274 558 ntBASIC20.49■□□□□ 0.87
Stra8P70278 Mir8098-201ENSMUST00000184011 137 ntBASIC20.49■□□□□ 0.87
Stra8P70278 Gm28659-201ENSMUST00000188013 759 ntBASIC20.49■□□□□ 0.87
Stra8P70278 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Stra8P70278 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC20.49■□□□□ 0.87
Stra8P70278 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC20.49■□□□□ 0.87
Stra8P70278 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Stra8P70278 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Stra8P70278 Gm10355-201ENSMUST00000097146 517 ntBASIC20.49■□□□□ 0.87
Stra8P70278 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC20.49■□□□□ 0.87
Stra8P70278 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Stra8P70278 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Stra8P70278 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Stra8P70278 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Stra8P70278 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Stra8P70278 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Stra8P70278 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Stra8P70278 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC20.48■□□□□ 0.87
Stra8P70278 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms