Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.05■□□□□ -0
ThraP63058 Gm26308-201ENSMUST00000157768 69 ntBASIC15.05■□□□□ -0
ThraP63058 Gm18489-201ENSMUST00000172565 551 ntBASIC15.05■□□□□ -0
ThraP63058 Gm9682-201ENSMUST00000197505 556 ntBASIC15.05■□□□□ -0
ThraP63058 Gm7787-201ENSMUST00000216858 688 ntBASIC15.05■□□□□ -0
ThraP63058 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.05■□□□□ -0
ThraP63058 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.05■□□□□ -0
ThraP63058 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ThraP63058 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
ThraP63058 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.05■□□□□ -0
ThraP63058 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.05■□□□□ -0
ThraP63058 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
ThraP63058 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.05■□□□□ -0
ThraP63058 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.05■□□□□ -0
ThraP63058 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ThraP63058 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.05■□□□□ -0
ThraP63058 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ThraP63058 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ThraP63058 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.05■□□□□ -0
ThraP63058 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.05■□□□□ -0
ThraP63058 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
ThraP63058 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.05■□□□□ -0
ThraP63058 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.05■□□□□ -0
ThraP63058 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.05■□□□□ -0
ThraP63058 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
ThraP63058 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
ThraP63058 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.05■□□□□ -0
ThraP63058 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.05■□□□□ -0
ThraP63058 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.05■□□□□ -0
ThraP63058 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.05■□□□□ -0
ThraP63058 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.05■□□□□ -0
ThraP63058 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ThraP63058 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ThraP63058 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ThraP63058 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.04■□□□□ -0
ThraP63058 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.04■□□□□ -0
ThraP63058 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
ThraP63058 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
ThraP63058 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
ThraP63058 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ThraP63058 Gm12134-201ENSMUST00000122109 520 ntBASIC15.04■□□□□ -0
ThraP63058 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
ThraP63058 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ThraP63058 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.04■□□□□ -0
ThraP63058 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
ThraP63058 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ThraP63058 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.04■□□□□ -0
ThraP63058 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ThraP63058 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ThraP63058 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.04■□□□□ -0
ThraP63058 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.04■□□□□ -0
ThraP63058 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ThraP63058 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.04■□□□□ -0
ThraP63058 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
ThraP63058 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
ThraP63058 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
ThraP63058 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.03■□□□□ -0
ThraP63058 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ThraP63058 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ThraP63058 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ThraP63058 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.03■□□□□ -0
ThraP63058 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ThraP63058 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ThraP63058 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ThraP63058 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ThraP63058 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.03■□□□□ -0
ThraP63058 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ThraP63058 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.03■□□□□ -0
ThraP63058 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ThraP63058 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
ThraP63058 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.03■□□□□ -0
ThraP63058 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.03■□□□□ -0
ThraP63058 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.03■□□□□ -0
ThraP63058 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.03■□□□□ -0
ThraP63058 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.03■□□□□ -0
ThraP63058 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.03■□□□□ -0
ThraP63058 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.03■□□□□ -0
ThraP63058 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.03■□□□□ -0
ThraP63058 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ThraP63058 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ThraP63058 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.03■□□□□ -0
ThraP63058 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ThraP63058 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ThraP63058 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.03■□□□□ -0
ThraP63058 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.03■□□□□ -0
ThraP63058 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ThraP63058 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
ThraP63058 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.03■□□□□ -0
ThraP63058 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ThraP63058 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ThraP63058 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ThraP63058 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ThraP63058 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.02■□□□□ -0
ThraP63058 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.02■□□□□ -0
ThraP63058 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.02■□□□□ -0
ThraP63058 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
ThraP63058 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ThraP63058 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ThraP63058 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ThraP63058 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms