Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.64□□□□□ -0.71
Cks1bP61025 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Gm15039-201ENSMUST00000118914 875 ntBASIC10.64□□□□□ -0.71
Cks1bP61025 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC10.64□□□□□ -0.71
Cks1bP61025 Mir5122-201ENSMUST00000175004 89 ntBASIC10.64□□□□□ -0.71
Cks1bP61025 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC10.64□□□□□ -0.71
Cks1bP61025 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
Cks1bP61025 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC10.64□□□□□ -0.71
Cks1bP61025 CT025689.6-201ENSMUST00000224991 1104 ntBASIC10.64□□□□□ -0.71
Cks1bP61025 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC10.64□□□□□ -0.71
Cks1bP61025 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC10.64□□□□□ -0.71
Cks1bP61025 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Cks1bP61025 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC10.64□□□□□ -0.71
Cks1bP61025 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC10.64□□□□□ -0.71
Cks1bP61025 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1bP61025 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1bP61025 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC10.63□□□□□ -0.71
Cks1bP61025 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.63□□□□□ -0.71
Cks1bP61025 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Cks1bP61025 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC10.63□□□□□ -0.71
Cks1bP61025 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1bP61025 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1bP61025 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1bP61025 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1bP61025 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1bP61025 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1bP61025 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1bP61025 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1bP61025 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
Cks1bP61025 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1bP61025 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC10.63□□□□□ -0.71
Cks1bP61025 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1bP61025 Gm30025-201ENSMUST00000218555 728 ntBASIC10.63□□□□□ -0.71
Cks1bP61025 AC159205.6-201ENSMUST00000224935 887 ntBASIC10.63□□□□□ -0.71
Cks1bP61025 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1bP61025 Gm5417-201ENSMUST00000079706 384 ntBASIC10.63□□□□□ -0.71
Cks1bP61025 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1bP61025 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Cks1bP61025 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1bP61025 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1bP61025 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1bP61025 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1bP61025 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1bP61025 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1bP61025 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1bP61025 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1bP61025 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Cks1bP61025 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Cks1bP61025 Gm12620-201ENSMUST00000119791 1986 ntBASIC10.63□□□□□ -0.71
Cks1bP61025 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1bP61025 Gm12612-201ENSMUST00000140182 1986 ntBASIC10.63□□□□□ -0.71
Cks1bP61025 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC10.63□□□□□ -0.71
Cks1bP61025 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC10.63□□□□□ -0.71
Cks1bP61025 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1bP61025 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC10.63□□□□□ -0.71
Cks1bP61025 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1bP61025 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1bP61025 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1bP61025 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1bP61025 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1bP61025 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1bP61025 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1bP61025 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1bP61025 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC10.62□□□□□ -0.71
Cks1bP61025 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1bP61025 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1bP61025 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
Cks1bP61025 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1bP61025 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1bP61025 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1bP61025 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1bP61025 Gm14780-201ENSMUST00000118387 2737 ntBASIC10.62□□□□□ -0.71
Cks1bP61025 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms