Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nphp4P59240 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nphp4P59240 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nphp4P59240 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nphp4P59240 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nphp4P59240 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nphp4P59240 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nphp4P59240 Gm14042-201ENSMUST00000120139 833 ntBASIC19.96■□□□□ 0.79
Nphp4P59240 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC19.96■□□□□ 0.79
Nphp4P59240 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC19.96■□□□□ 0.79
Nphp4P59240 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nphp4P59240 AC140375.2-201ENSMUST00000225283 584 ntBASIC19.96■□□□□ 0.79
Nphp4P59240 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nphp4P59240 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nphp4P59240 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nphp4P59240 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nphp4P59240 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nphp4P59240 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nphp4P59240 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nphp4P59240 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nphp4P59240 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nphp4P59240 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nphp4P59240 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC19.95■□□□□ 0.78
Nphp4P59240 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nphp4P59240 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nphp4P59240 Gm6916-202ENSMUST00000205523 195 ntBASIC19.95■□□□□ 0.78
Nphp4P59240 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nphp4P59240 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nphp4P59240 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nphp4P59240 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nphp4P59240 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nphp4P59240 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nphp4P59240 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nphp4P59240 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nphp4P59240 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nphp4P59240 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nphp4P59240 Gm45667-201ENSMUST00000210380 1316 ntBASIC19.95■□□□□ 0.78
Nphp4P59240 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nphp4P59240 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC19.95■□□□□ 0.78
Nphp4P59240 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Nphp4P59240 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Nphp4P59240 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
Nphp4P59240 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nphp4P59240 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC19.95■□□□□ 0.78
Nphp4P59240 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nphp4P59240 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nphp4P59240 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nphp4P59240 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC19.94■□□□□ 0.78
Nphp4P59240 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC19.94■□□□□ 0.78
Nphp4P59240 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nphp4P59240 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC19.94■□□□□ 0.78
Nphp4P59240 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nphp4P59240 Gm6218-201ENSMUST00000219812 628 ntBASIC19.94■□□□□ 0.78
Nphp4P59240 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nphp4P59240 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nphp4P59240 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nphp4P59240 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nphp4P59240 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nphp4P59240 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nphp4P59240 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nphp4P59240 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nphp4P59240 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nphp4P59240 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC19.94■□□□□ 0.78
Nphp4P59240 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nphp4P59240 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nphp4P59240 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nphp4P59240 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nphp4P59240 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Nphp4P59240 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Nphp4P59240 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nphp4P59240 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nphp4P59240 Gm9522-201ENSMUST00000182394 926 ntBASIC19.93■□□□□ 0.78
Nphp4P59240 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nphp4P59240 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nphp4P59240 Gm7390-201ENSMUST00000212452 1216 ntBASIC19.93■□□□□ 0.78
Nphp4P59240 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nphp4P59240 Gm20445-201ENSMUST00000061905 565 ntBASIC19.93■□□□□ 0.78
Nphp4P59240 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nphp4P59240 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nphp4P59240 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Nphp4P59240 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nphp4P59240 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Nphp4P59240 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Nphp4P59240 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC19.93■□□□□ 0.78
Nphp4P59240 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nphp4P59240 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nphp4P59240 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nphp4P59240 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nphp4P59240 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC19.93■□□□□ 0.78
Nphp4P59240 Gm12882-201ENSMUST00000121696 517 ntBASIC19.93■□□□□ 0.78
Nphp4P59240 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nphp4P59240 Gm45195-201ENSMUST00000205597 1008 ntBASIC19.93■□□□□ 0.78
Nphp4P59240 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC19.93■□□□□ 0.78
Nphp4P59240 AC135669.1-201ENSMUST00000213585 412 ntBASIC19.93■□□□□ 0.78
Nphp4P59240 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nphp4P59240 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nphp4P59240 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
Nphp4P59240 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nphp4P59240 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nphp4P59240 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms