Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tpm2P58774 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Tpm2P58774 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Tpm2P58774 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Tpm2P58774 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm2P58774 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm2P58774 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm2P58774 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Tpm2P58774 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Tpm2P58774 Gm29518-201ENSMUST00000190858 372 ntBASIC17.08■□□□□ 0.32
Tpm2P58774 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.08■□□□□ 0.32
Tpm2P58774 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Tpm2P58774 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm2P58774 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Tpm2P58774 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm2P58774 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Tpm2P58774 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm2P58774 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Tpm2P58774 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
Tpm2P58774 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
Tpm2P58774 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm2P58774 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm2P58774 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm2P58774 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Tpm2P58774 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm2P58774 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm2P58774 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm2P58774 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm2P58774 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm2P58774 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm2P58774 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Tpm2P58774 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm2P58774 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Tpm2P58774 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm2P58774 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm2P58774 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm2P58774 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.07■□□□□ 0.32
Tpm2P58774 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Tpm2P58774 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.07■□□□□ 0.32
Tpm2P58774 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.07■□□□□ 0.32
Tpm2P58774 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.07■□□□□ 0.32
Tpm2P58774 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.07■□□□□ 0.32
Tpm2P58774 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.07■□□□□ 0.32
Tpm2P58774 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.07■□□□□ 0.32
Tpm2P58774 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.07■□□□□ 0.32
Tpm2P58774 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.07■□□□□ 0.32
Tpm2P58774 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.07■□□□□ 0.32
Tpm2P58774 Gm8825-201ENSMUST00000182565 998 ntBASIC17.07■□□□□ 0.32
Tpm2P58774 Gm4518-201ENSMUST00000182638 718 ntBASIC17.07■□□□□ 0.32
Tpm2P58774 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.07■□□□□ 0.32
Tpm2P58774 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.07■□□□□ 0.32
Tpm2P58774 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.07■□□□□ 0.32
Tpm2P58774 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.07■□□□□ 0.32
Tpm2P58774 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm2P58774 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.07■□□□□ 0.32
Tpm2P58774 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.07■□□□□ 0.32
Tpm2P58774 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm2P58774 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm2P58774 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm2P58774 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm2P58774 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm2P58774 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm2P58774 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm2P58774 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Tpm2P58774 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm2P58774 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm2P58774 Gm28182-201ENSMUST00000188354 2477 ntBASIC17.06■□□□□ 0.32
Tpm2P58774 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm2P58774 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm2P58774 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm2P58774 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.06■□□□□ 0.32
Tpm2P58774 Gm9172-201ENSMUST00000212092 954 ntBASIC17.06■□□□□ 0.32
Tpm2P58774 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.06■□□□□ 0.32
Tpm2P58774 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm2P58774 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm2P58774 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm2P58774 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm2P58774 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm2P58774 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm2P58774 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm2P58774 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm2P58774 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.06■□□□□ 0.32
Tpm2P58774 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.05■□□□□ 0.32
Tpm2P58774 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm2P58774 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm2P58774 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm2P58774 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.05■□□□□ 0.32
Tpm2P58774 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm2P58774 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm2P58774 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm2P58774 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Tpm2P58774 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm2P58774 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm2P58774 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm2P58774 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm2P58774 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm2P58774 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm2P58774 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
Tpm2P58774 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Tpm2P58774 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms