Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.03□□□□□ -0.48
Sssca1P56873 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sssca1P56873 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Sssca1P56873 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sssca1P56873 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sssca1P56873 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.48
Sssca1P56873 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sssca1P56873 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Sssca1P56873 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sssca1P56873 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sssca1P56873 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sssca1P56873 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sssca1P56873 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sssca1P56873 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sssca1P56873 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sssca1P56873 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sssca1P56873 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sssca1P56873 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.02□□□□□ -0.49
Sssca1P56873 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sssca1P56873 Gm6659-201ENSMUST00000174752 547 ntBASIC12.02□□□□□ -0.49
Sssca1P56873 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.02□□□□□ -0.49
Sssca1P56873 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.02□□□□□ -0.49
Sssca1P56873 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.02□□□□□ -0.49
Sssca1P56873 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Sssca1P56873 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sssca1P56873 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sssca1P56873 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sssca1P56873 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sssca1P56873 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sssca1P56873 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sssca1P56873 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sssca1P56873 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.02□□□□□ -0.49
Sssca1P56873 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sssca1P56873 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.02□□□□□ -0.49
Sssca1P56873 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sssca1P56873 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sssca1P56873 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sssca1P56873 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sssca1P56873 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Sssca1P56873 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sssca1P56873 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sssca1P56873 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Sssca1P56873 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sssca1P56873 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.01□□□□□ -0.49
Sssca1P56873 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sssca1P56873 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.01□□□□□ -0.49
Sssca1P56873 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sssca1P56873 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sssca1P56873 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sssca1P56873 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sssca1P56873 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sssca1P56873 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sssca1P56873 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sssca1P56873 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sssca1P56873 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sssca1P56873 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sssca1P56873 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.01□□□□□ -0.49
Sssca1P56873 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sssca1P56873 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sssca1P56873 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.01□□□□□ -0.49
Sssca1P56873 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Sssca1P56873 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sssca1P56873 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Sssca1P56873 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Sssca1P56873 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sssca1P56873 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.01□□□□□ -0.49
Sssca1P56873 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sssca1P56873 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sssca1P56873 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sssca1P56873 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sssca1P56873 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sssca1P56873 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sssca1P56873 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.01□□□□□ -0.49
Sssca1P56873 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sssca1P56873 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sssca1P56873 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sssca1P56873 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sssca1P56873 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.01□□□□□ -0.49
Sssca1P56873 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sssca1P56873 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sssca1P56873 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sssca1P56873 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sssca1P56873 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sssca1P56873 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12□□□□□ -0.49
Sssca1P56873 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sssca1P56873 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Sssca1P56873 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms