Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Fdft1P53798 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fdft1P53798 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fdft1P53798 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fdft1P53798 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fdft1P53798 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Fdft1P53798 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Fdft1P53798 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Fdft1P53798 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fdft1P53798 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Fdft1P53798 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fdft1P53798 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fdft1P53798 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fdft1P53798 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fdft1P53798 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fdft1P53798 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fdft1P53798 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fdft1P53798 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fdft1P53798 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fdft1P53798 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fdft1P53798 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fdft1P53798 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fdft1P53798 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fdft1P53798 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Fdft1P53798 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fdft1P53798 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Fdft1P53798 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fdft1P53798 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fdft1P53798 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fdft1P53798 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.85□□□□□ -0.03
Fdft1P53798 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Fdft1P53798 Gm45167-201ENSMUST00000208007 322 ntBASIC14.85□□□□□ -0.03
Fdft1P53798 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.85□□□□□ -0.03
Fdft1P53798 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fdft1P53798 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Fdft1P53798 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fdft1P53798 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Fdft1P53798 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.85□□□□□ -0.03
Fdft1P53798 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Fdft1P53798 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Fdft1P53798 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Fdft1P53798 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fdft1P53798 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fdft1P53798 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fdft1P53798 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Fdft1P53798 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fdft1P53798 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fdft1P53798 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fdft1P53798 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Fdft1P53798 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fdft1P53798 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.84□□□□□ -0.03
Fdft1P53798 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Fdft1P53798 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.84□□□□□ -0.03
Fdft1P53798 Gm11764-201ENSMUST00000120221 623 ntBASIC14.84□□□□□ -0.03
Fdft1P53798 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.84□□□□□ -0.03
Fdft1P53798 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fdft1P53798 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Fdft1P53798 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.84□□□□□ -0.03
Fdft1P53798 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.84□□□□□ -0.03
Fdft1P53798 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.84□□□□□ -0.03
Fdft1P53798 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
Fdft1P53798 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fdft1P53798 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Fdft1P53798 AV026068-213ENSMUST00000223675 1171 ntBASIC14.84□□□□□ -0.03
Fdft1P53798 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Fdft1P53798 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fdft1P53798 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fdft1P53798 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fdft1P53798 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Fdft1P53798 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Fdft1P53798 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fdft1P53798 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fdft1P53798 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fdft1P53798 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Fdft1P53798 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fdft1P53798 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fdft1P53798 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fdft1P53798 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Fdft1P53798 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fdft1P53798 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.84□□□□□ -0.03
Fdft1P53798 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fdft1P53798 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Fdft1P53798 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Fdft1P53798 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Fdft1P53798 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Fdft1P53798 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
Fdft1P53798 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Fdft1P53798 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Fdft1P53798 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Fdft1P53798 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Fdft1P53798 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Fdft1P53798 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Fdft1P53798 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Fdft1P53798 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Fdft1P53798 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.83□□□□□ -0.04
Fdft1P53798 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Fdft1P53798 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Fdft1P53798 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Fdft1P53798 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Fdft1P53798 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms