Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga2P52927 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.65□□□□□ -0.39
Hmga2P52927 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Hmga2P52927 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Hmga2P52927 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.64□□□□□ -0.39
Hmga2P52927 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.64□□□□□ -0.39
Hmga2P52927 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.64□□□□□ -0.39
Hmga2P52927 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Hmga2P52927 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmga2P52927 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmga2P52927 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hmga2P52927 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmga2P52927 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.63□□□□□ -0.39
Hmga2P52927 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmga2P52927 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Hmga2P52927 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Hmga2P52927 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmga2P52927 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmga2P52927 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmga2P52927 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmga2P52927 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Hmga2P52927 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmga2P52927 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Hmga2P52927 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmga2P52927 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hmga2P52927 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Hmga2P52927 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Hmga2P52927 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Hmga2P52927 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Hmga2P52927 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmga2P52927 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
Hmga2P52927 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Hmga2P52927 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmga2P52927 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.63□□□□□ -0.39
Hmga2P52927 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.63□□□□□ -0.39
Hmga2P52927 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmga2P52927 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmga2P52927 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hmga2P52927 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.63□□□□□ -0.39
Hmga2P52927 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmga2P52927 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmga2P52927 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmga2P52927 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.63□□□□□ -0.39
Hmga2P52927 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Hmga2P52927 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmga2P52927 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmga2P52927 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.63□□□□□ -0.39
Hmga2P52927 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmga2P52927 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmga2P52927 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmga2P52927 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmga2P52927 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmga2P52927 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.62□□□□□ -0.39
Hmga2P52927 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hmga2P52927 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmga2P52927 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmga2P52927 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hmga2P52927 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmga2P52927 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Hmga2P52927 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.62□□□□□ -0.39
Hmga2P52927 Gm15372-201ENSMUST00000120729 834 ntBASIC12.62□□□□□ -0.39
Hmga2P52927 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Hmga2P52927 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hmga2P52927 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.62□□□□□ -0.39
Hmga2P52927 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.62□□□□□ -0.39
Hmga2P52927 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmga2P52927 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hmga2P52927 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmga2P52927 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmga2P52927 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms