Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx3P48381 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.43□□□□□ -0.26
Rfx3P48381 Gm44357-201ENSMUST00000195897 142 ntBASIC13.43□□□□□ -0.26
Rfx3P48381 Gm19658-201ENSMUST00000196231 138 ntBASIC13.43□□□□□ -0.26
Rfx3P48381 Gm44367-201ENSMUST00000196836 138 ntBASIC13.43□□□□□ -0.26
Rfx3P48381 Gm44350-201ENSMUST00000197197 138 ntBASIC13.43□□□□□ -0.26
Rfx3P48381 Gm44390-201ENSMUST00000197533 144 ntBASIC13.43□□□□□ -0.26
Rfx3P48381 Gm44313-201ENSMUST00000198018 138 ntBASIC13.43□□□□□ -0.26
Rfx3P48381 Gm44486-201ENSMUST00000198508 138 ntBASIC13.43□□□□□ -0.26
Rfx3P48381 Gm44314-201ENSMUST00000199263 138 ntBASIC13.43□□□□□ -0.26
Rfx3P48381 Gm44394-201ENSMUST00000199558 138 ntBASIC13.43□□□□□ -0.26
Rfx3P48381 Gm44484-201ENSMUST00000199873 138 ntBASIC13.43□□□□□ -0.26
Rfx3P48381 Gm44466-201ENSMUST00000200264 138 ntBASIC13.43□□□□□ -0.26
Rfx3P48381 Gm44359-201ENSMUST00000200671 138 ntBASIC13.43□□□□□ -0.26
Rfx3P48381 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.43□□□□□ -0.26
Rfx3P48381 Gm6376-201ENSMUST00000209407 580 ntBASIC13.43□□□□□ -0.26
Rfx3P48381 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.43□□□□□ -0.26
Rfx3P48381 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx3P48381 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx3P48381 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx3P48381 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx3P48381 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.43□□□□□ -0.26
Rfx3P48381 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Rfx3P48381 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.43□□□□□ -0.26
Rfx3P48381 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Rfx3P48381 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx3P48381 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx3P48381 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
Rfx3P48381 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx3P48381 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx3P48381 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Rfx3P48381 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Rfx3P48381 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfx3P48381 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rfx3P48381 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfx3P48381 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfx3P48381 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.42□□□□□ -0.26
Rfx3P48381 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rfx3P48381 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfx3P48381 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.42□□□□□ -0.26
Rfx3P48381 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Rfx3P48381 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rfx3P48381 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfx3P48381 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfx3P48381 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.42□□□□□ -0.26
Rfx3P48381 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfx3P48381 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rfx3P48381 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfx3P48381 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.42□□□□□ -0.26
Rfx3P48381 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.42□□□□□ -0.26
Rfx3P48381 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.42□□□□□ -0.26
Rfx3P48381 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.42□□□□□ -0.26
Rfx3P48381 Gm6089-201ENSMUST00000197666 938 ntBASIC13.42□□□□□ -0.26
Rfx3P48381 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.42□□□□□ -0.26
Rfx3P48381 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.42□□□□□ -0.26
Rfx3P48381 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfx3P48381 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Rfx3P48381 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfx3P48381 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfx3P48381 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfx3P48381 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfx3P48381 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rfx3P48381 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfx3P48381 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rfx3P48381 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfx3P48381 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfx3P48381 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfx3P48381 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rfx3P48381 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfx3P48381 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfx3P48381 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfx3P48381 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rfx3P48381 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.41□□□□□ -0.26
Rfx3P48381 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfx3P48381 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfx3P48381 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rfx3P48381 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfx3P48381 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfx3P48381 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rfx3P48381 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rfx3P48381 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfx3P48381 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Rfx3P48381 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rfx3P48381 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rfx3P48381 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.41□□□□□ -0.26
Rfx3P48381 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.41□□□□□ -0.26
Rfx3P48381 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfx3P48381 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfx3P48381 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.41□□□□□ -0.26
Rfx3P48381 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.41□□□□□ -0.26
Rfx3P48381 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfx3P48381 Rps4l-201ENSMUST00000071745 943 ntBASIC13.41□□□□□ -0.26
Rfx3P48381 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rfx3P48381 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfx3P48381 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.41□□□□□ -0.26
Rfx3P48381 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rfx3P48381 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.41□□□□□ -0.26
Rfx3P48381 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfx3P48381 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Rfx3P48381 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms