Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox18P43680 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox18P43680 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox18P43680 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox18P43680 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox18P43680 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Sox18P43680 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.24□□□□□ -0.13
Sox18P43680 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox18P43680 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.23□□□□□ -0.13
Sox18P43680 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox18P43680 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox18P43680 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox18P43680 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.23□□□□□ -0.13
Sox18P43680 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox18P43680 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox18P43680 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Sox18P43680 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.23□□□□□ -0.13
Sox18P43680 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.23□□□□□ -0.13
Sox18P43680 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.23□□□□□ -0.13
Sox18P43680 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.23□□□□□ -0.13
Sox18P43680 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.23□□□□□ -0.13
Sox18P43680 Gm15483-201ENSMUST00000120338 456 ntBASIC14.23□□□□□ -0.13
Sox18P43680 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox18P43680 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox18P43680 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.23□□□□□ -0.13
Sox18P43680 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.23□□□□□ -0.13
Sox18P43680 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox18P43680 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox18P43680 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox18P43680 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox18P43680 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox18P43680 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Sox18P43680 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.23□□□□□ -0.13
Sox18P43680 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox18P43680 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox18P43680 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox18P43680 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox18P43680 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Sox18P43680 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox18P43680 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox18P43680 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox18P43680 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Sox18P43680 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Sox18P43680 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox18P43680 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox18P43680 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox18P43680 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Sox18P43680 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox18P43680 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox18P43680 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox18P43680 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox18P43680 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox18P43680 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox18P43680 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox18P43680 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox18P43680 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.22□□□□□ -0.13
Sox18P43680 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sox18P43680 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox18P43680 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Sox18P43680 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox18P43680 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Sox18P43680 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox18P43680 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox18P43680 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox18P43680 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox18P43680 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC14.22□□□□□ -0.13
Sox18P43680 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.22□□□□□ -0.13
Sox18P43680 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC14.22□□□□□ -0.13
Sox18P43680 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC14.22□□□□□ -0.13
Sox18P43680 AC102523.2-201ENSMUST00000227813 983 ntBASIC14.22□□□□□ -0.13
Sox18P43680 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox18P43680 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox18P43680 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox18P43680 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox18P43680 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox18P43680 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox18P43680 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox18P43680 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.22□□□□□ -0.13
Sox18P43680 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox18P43680 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox18P43680 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.22□□□□□ -0.13
Sox18P43680 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox18P43680 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox18P43680 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox18P43680 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Sox18P43680 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sox18P43680 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox18P43680 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.21□□□□□ -0.13
Sox18P43680 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox18P43680 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.21□□□□□ -0.13
Sox18P43680 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox18P43680 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.21□□□□□ -0.13
Sox18P43680 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox18P43680 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sox18P43680 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox18P43680 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sox18P43680 Gm14042-201ENSMUST00000120139 833 ntBASIC14.21□□□□□ -0.13
Sox18P43680 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Sox18P43680 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC14.21□□□□□ -0.13
Sox18P43680 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms