Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-2P42586 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-2P42586 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-2P42586 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-2P42586 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-2P42586 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-2P42586 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-2P42586 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.61□□□□□ -0.23
Nkx2-2P42586 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-2P42586 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nkx2-2P42586 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-2P42586 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-2P42586 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Nkx2-2P42586 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-2P42586 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Nkx2-2P42586 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-2P42586 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-2P42586 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Nkx2-2P42586 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-2P42586 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Nkx2-2P42586 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-2P42586 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-2P42586 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Nkx2-2P42586 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.6□□□□□ -0.23
Nkx2-2P42586 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-2P42586 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-2P42586 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.6□□□□□ -0.23
Nkx2-2P42586 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Nkx2-2P42586 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-2P42586 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-2P42586 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-2P42586 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-2P42586 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-2P42586 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-2P42586 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Nkx2-2P42586 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-2P42586 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Nkx2-2P42586 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-2P42586 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-2P42586 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-2P42586 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-2P42586 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.59□□□□□ -0.23
Nkx2-2P42586 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.59□□□□□ -0.23
Nkx2-2P42586 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Gm15427-201ENSMUST00000117288 531 ntBASIC13.59□□□□□ -0.23
Nkx2-2P42586 Gm14494-201ENSMUST00000118786 435 ntBASIC13.59□□□□□ -0.23
Nkx2-2P42586 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.59□□□□□ -0.23
Nkx2-2P42586 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Gm9726-201ENSMUST00000180321 678 ntBASIC13.59□□□□□ -0.23
Nkx2-2P42586 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Nkx2-2P42586 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-2P42586 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nkx2-2P42586 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nkx2-2P42586 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Nkx2-2P42586 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Nkx2-2P42586 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Nkx2-2P42586 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-2P42586 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-2P42586 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-2P42586 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-2P42586 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.58□□□□□ -0.24
Nkx2-2P42586 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-2P42586 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.58□□□□□ -0.24
Nkx2-2P42586 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-2P42586 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Nkx2-2P42586 Rpph1-201ENSMUST00000175096 319 ntBASIC13.58□□□□□ -0.24
Nkx2-2P42586 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.58□□□□□ -0.24
Nkx2-2P42586 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.58□□□□□ -0.24
Nkx2-2P42586 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.58□□□□□ -0.24
Nkx2-2P42586 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.58□□□□□ -0.24
Nkx2-2P42586 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-2P42586 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms