Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC15.21■□□□□ 0.03
Cxcl12P40224 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cxcl12P40224 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cxcl12P40224 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cxcl12P40224 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cxcl12P40224 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cxcl12P40224 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cxcl12P40224 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cxcl12P40224 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cxcl12P40224 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cxcl12P40224 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cxcl12P40224 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cxcl12P40224 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.21■□□□□ 0.02
Cxcl12P40224 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cxcl12P40224 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Cxcl12P40224 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cxcl12P40224 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cxcl12P40224 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cxcl12P40224 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cxcl12P40224 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cxcl12P40224 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cxcl12P40224 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cxcl12P40224 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cxcl12P40224 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cxcl12P40224 Gm12341-201ENSMUST00000119724 503 ntBASIC15.2■□□□□ 0.02
Cxcl12P40224 Gm15393-201ENSMUST00000120499 219 ntBASIC15.2■□□□□ 0.02
Cxcl12P40224 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC15.2■□□□□ 0.02
Cxcl12P40224 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
Cxcl12P40224 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cxcl12P40224 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cxcl12P40224 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cxcl12P40224 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.2■□□□□ 0.02
Cxcl12P40224 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cxcl12P40224 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cxcl12P40224 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cxcl12P40224 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Cxcl12P40224 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cxcl12P40224 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.2■□□□□ 0.02
Cxcl12P40224 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cxcl12P40224 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cxcl12P40224 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cxcl12P40224 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cxcl12P40224 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.19■□□□□ 0.02
Cxcl12P40224 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cxcl12P40224 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cxcl12P40224 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cxcl12P40224 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
Cxcl12P40224 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cxcl12P40224 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cxcl12P40224 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cxcl12P40224 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.19■□□□□ 0.02
Cxcl12P40224 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.19■□□□□ 0.02
Cxcl12P40224 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.19■□□□□ 0.02
Cxcl12P40224 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.19■□□□□ 0.02
Cxcl12P40224 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cxcl12P40224 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cxcl12P40224 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cxcl12P40224 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cxcl12P40224 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cxcl12P40224 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC15.19■□□□□ 0.02
Cxcl12P40224 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Cxcl12P40224 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cxcl12P40224 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.19■□□□□ 0.02
Cxcl12P40224 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cxcl12P40224 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cxcl12P40224 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cxcl12P40224 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cxcl12P40224 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cxcl12P40224 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.19■□□□□ 0.02
Cxcl12P40224 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cxcl12P40224 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.19■□□□□ 0.02
Cxcl12P40224 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl12P40224 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Cxcl12P40224 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl12P40224 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl12P40224 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl12P40224 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.18■□□□□ 0.02
Cxcl12P40224 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.18■□□□□ 0.02
Cxcl12P40224 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl12P40224 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.18■□□□□ 0.02
Cxcl12P40224 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl12P40224 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl12P40224 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.18■□□□□ 0.02
Cxcl12P40224 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl12P40224 Gm13464-201ENSMUST00000119418 935 ntBASIC15.18■□□□□ 0.02
Cxcl12P40224 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Cxcl12P40224 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.18■□□□□ 0.02
Cxcl12P40224 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.18■□□□□ 0.02
Cxcl12P40224 AA619741-201ENSMUST00000195095 646 ntBASIC15.18■□□□□ 0.02
Cxcl12P40224 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl12P40224 Gm17794-201ENSMUST00000220252 955 ntBASIC15.18■□□□□ 0.02
Cxcl12P40224 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Cxcl12P40224 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl12P40224 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl12P40224 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl12P40224 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl12P40224 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl12P40224 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl12P40224 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cxcl12P40224 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms