Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Fen1P39749 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Fen1P39749 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Fen1P39749 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Fen1P39749 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Fen1P39749 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Fen1P39749 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Fen1P39749 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Fen1P39749 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.98□□□□□ -0.01
Fen1P39749 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.98□□□□□ -0.01
Fen1P39749 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.98□□□□□ -0.01
Fen1P39749 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Fen1P39749 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.98□□□□□ -0.01
Fen1P39749 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.98□□□□□ -0.01
Fen1P39749 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Fen1P39749 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Fen1P39749 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Fen1P39749 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Fen1P39749 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.98□□□□□ -0.01
Fen1P39749 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Fen1P39749 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Fen1P39749 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Fen1P39749 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.98□□□□□ -0.01
Fen1P39749 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.98□□□□□ -0.01
Fen1P39749 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Fen1P39749 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Fen1P39749 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.98□□□□□ -0.01
Fen1P39749 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Fen1P39749 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Fen1P39749 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Fen1P39749 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Fen1P39749 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Fen1P39749 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Fen1P39749 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Fen1P39749 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.97□□□□□ -0.01
Fen1P39749 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.97□□□□□ -0.01
Fen1P39749 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Fen1P39749 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Fen1P39749 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.97□□□□□ -0.01
Fen1P39749 Rprl3-201ENSMUST00000157400 290 ntBASIC14.97□□□□□ -0.01
Fen1P39749 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Fen1P39749 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.97□□□□□ -0.01
Fen1P39749 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Fen1P39749 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Fen1P39749 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Fen1P39749 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Fen1P39749 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Fen1P39749 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.97□□□□□ -0.01
Fen1P39749 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Fen1P39749 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Fen1P39749 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Fen1P39749 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Fen1P39749 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Fen1P39749 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Fen1P39749 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Fen1P39749 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Fen1P39749 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Fen1P39749 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Fen1P39749 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.96□□□□□ -0.01
Fen1P39749 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Fen1P39749 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Fen1P39749 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.96□□□□□ -0.01
Fen1P39749 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Fen1P39749 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Fen1P39749 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.96□□□□□ -0.01
Fen1P39749 Gm44454-201ENSMUST00000198541 138 ntBASIC14.96□□□□□ -0.01
Fen1P39749 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.96□□□□□ -0.01
Fen1P39749 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Fen1P39749 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Fen1P39749 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Fen1P39749 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Fen1P39749 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Fen1P39749 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.96□□□□□ -0.02
Fen1P39749 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Fen1P39749 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Fen1P39749 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.95□□□□□ -0.02
Fen1P39749 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Fen1P39749 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fen1P39749 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Fen1P39749 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fen1P39749 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fen1P39749 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fen1P39749 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fen1P39749 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Fen1P39749 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Fen1P39749 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Fen1P39749 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fen1P39749 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Fen1P39749 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fen1P39749 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fen1P39749 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Fen1P39749 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fen1P39749 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fen1P39749 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Fen1P39749 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.95□□□□□ -0.02
Fen1P39749 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.95□□□□□ -0.02
Fen1P39749 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fen1P39749 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Fen1P39749 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Fen1P39749 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms