Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Upk2P38575 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Upk2P38575 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Upk2P38575 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Upk2P38575 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Upk2P38575 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Upk2P38575 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk2P38575 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk2P38575 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Upk2P38575 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.02□□□□□ -0.33
Upk2P38575 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.02□□□□□ -0.33
Upk2P38575 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.02□□□□□ -0.33
Upk2P38575 Psmb5-202ENSMUST00000227257 622 ntBASIC13.02□□□□□ -0.33
Upk2P38575 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk2P38575 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk2P38575 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk2P38575 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Upk2P38575 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk2P38575 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk2P38575 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk2P38575 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk2P38575 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk2P38575 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.02□□□□□ -0.33
Upk2P38575 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk2P38575 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Upk2P38575 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.02□□□□□ -0.33
Upk2P38575 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Upk2P38575 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Upk2P38575 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.02□□□□□ -0.33
Upk2P38575 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk2P38575 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Upk2P38575 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Upk2P38575 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk2P38575 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk2P38575 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Upk2P38575 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Upk2P38575 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.01□□□□□ -0.33
Upk2P38575 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.01□□□□□ -0.33
Upk2P38575 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.01□□□□□ -0.33
Upk2P38575 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.01□□□□□ -0.33
Upk2P38575 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.01□□□□□ -0.33
Upk2P38575 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk2P38575 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Upk2P38575 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk2P38575 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Upk2P38575 Gm10605-202ENSMUST00000183019 3198 ntBASIC13□□□□□ -0.33
Upk2P38575 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk2P38575 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Upk2P38575 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk2P38575 Gm43509-201ENSMUST00000196551 2594 ntBASIC13□□□□□ -0.33
Upk2P38575 Gm5421-201ENSMUST00000181698 2354 ntBASIC13□□□□□ -0.33
Upk2P38575 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk2P38575 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Upk2P38575 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk2P38575 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Upk2P38575 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Upk2P38575 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Upk2P38575 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Upk2P38575 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk2P38575 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk2P38575 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13□□□□□ -0.33
Upk2P38575 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13□□□□□ -0.33
Upk2P38575 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13□□□□□ -0.33
Upk2P38575 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13□□□□□ -0.33
Upk2P38575 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13□□□□□ -0.33
Upk2P38575 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Upk2P38575 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13□□□□□ -0.33
Upk2P38575 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13□□□□□ -0.33
Upk2P38575 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms