Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LdlrP35951 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LdlrP35951 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LdlrP35951 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
LdlrP35951 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LdlrP35951 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LdlrP35951 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LdlrP35951 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LdlrP35951 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LdlrP35951 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LdlrP35951 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LdlrP35951 Gm23935-201ENSMUST00000102303 57 ntBASIC14.79□□□□□ -0.04
LdlrP35951 Gm24270-201ENSMUST00000102326 57 ntBASIC14.79□□□□□ -0.04
LdlrP35951 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
LdlrP35951 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LdlrP35951 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LdlrP35951 Gm13418-201ENSMUST00000119097 944 ntBASIC14.79□□□□□ -0.04
LdlrP35951 Gm15358-201ENSMUST00000119249 520 ntBASIC14.79□□□□□ -0.04
LdlrP35951 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LdlrP35951 Gm24245-201ENSMUST00000157318 57 ntBASIC14.79□□□□□ -0.04
LdlrP35951 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
LdlrP35951 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.79□□□□□ -0.04
LdlrP35951 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LdlrP35951 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.79□□□□□ -0.04
LdlrP35951 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LdlrP35951 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.79□□□□□ -0.04
LdlrP35951 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.79□□□□□ -0.04
LdlrP35951 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
LdlrP35951 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LdlrP35951 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LdlrP35951 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LdlrP35951 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LdlrP35951 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LdlrP35951 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LdlrP35951 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LdlrP35951 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LdlrP35951 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LdlrP35951 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LdlrP35951 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LdlrP35951 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LdlrP35951 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LdlrP35951 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
LdlrP35951 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LdlrP35951 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LdlrP35951 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LdlrP35951 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LdlrP35951 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.78□□□□□ -0.04
LdlrP35951 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LdlrP35951 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LdlrP35951 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LdlrP35951 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.78□□□□□ -0.04
LdlrP35951 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
LdlrP35951 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LdlrP35951 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
LdlrP35951 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LdlrP35951 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LdlrP35951 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LdlrP35951 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
LdlrP35951 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LdlrP35951 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LdlrP35951 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LdlrP35951 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
LdlrP35951 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.77□□□□□ -0.04
LdlrP35951 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LdlrP35951 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
LdlrP35951 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LdlrP35951 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LdlrP35951 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LdlrP35951 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LdlrP35951 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
LdlrP35951 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LdlrP35951 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LdlrP35951 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LdlrP35951 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
LdlrP35951 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.77□□□□□ -0.05
LdlrP35951 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.77□□□□□ -0.05
LdlrP35951 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
LdlrP35951 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
LdlrP35951 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
LdlrP35951 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
LdlrP35951 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.77□□□□□ -0.05
LdlrP35951 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LdlrP35951 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LdlrP35951 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LdlrP35951 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LdlrP35951 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
LdlrP35951 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
LdlrP35951 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
LdlrP35951 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.77□□□□□ -0.05
LdlrP35951 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
LdlrP35951 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.77□□□□□ -0.05
LdlrP35951 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LdlrP35951 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LdlrP35951 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LdlrP35951 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LdlrP35951 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LdlrP35951 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LdlrP35951 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.76□□□□□ -0.05
LdlrP35951 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LdlrP35951 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms