Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PdgfbP31240 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PdgfbP31240 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
PdgfbP31240 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PdgfbP31240 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.78□□□□□ -0.04
PdgfbP31240 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PdgfbP31240 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PdgfbP31240 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.78□□□□□ -0.04
PdgfbP31240 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.78□□□□□ -0.04
PdgfbP31240 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.78□□□□□ -0.04
PdgfbP31240 Gm2451-201ENSMUST00000199447 999 ntBASIC14.78□□□□□ -0.04
PdgfbP31240 Gm10290-201ENSMUST00000200451 999 ntBASIC14.78□□□□□ -0.04
PdgfbP31240 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.78□□□□□ -0.04
PdgfbP31240 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PdgfbP31240 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PdgfbP31240 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PdgfbP31240 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
PdgfbP31240 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PdgfbP31240 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PdgfbP31240 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PdgfbP31240 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PdgfbP31240 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PdgfbP31240 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PdgfbP31240 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PdgfbP31240 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PdgfbP31240 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PdgfbP31240 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PdgfbP31240 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.78□□□□□ -0.04
PdgfbP31240 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PdgfbP31240 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PdgfbP31240 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PdgfbP31240 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PdgfbP31240 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PdgfbP31240 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PdgfbP31240 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PdgfbP31240 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PdgfbP31240 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PdgfbP31240 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PdgfbP31240 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PdgfbP31240 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.77□□□□□ -0.04
PdgfbP31240 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PdgfbP31240 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PdgfbP31240 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PdgfbP31240 Gm12341-201ENSMUST00000119724 503 ntBASIC14.77□□□□□ -0.05
PdgfbP31240 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PdgfbP31240 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
PdgfbP31240 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PdgfbP31240 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
PdgfbP31240 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.77□□□□□ -0.05
PdgfbP31240 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.77□□□□□ -0.05
PdgfbP31240 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.77□□□□□ -0.05
PdgfbP31240 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PdgfbP31240 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.77□□□□□ -0.05
PdgfbP31240 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PdgfbP31240 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PdgfbP31240 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.77□□□□□ -0.05
PdgfbP31240 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PdgfbP31240 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PdgfbP31240 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PdgfbP31240 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PdgfbP31240 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
PdgfbP31240 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PdgfbP31240 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PdgfbP31240 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PdgfbP31240 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PdgfbP31240 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PdgfbP31240 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PdgfbP31240 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PdgfbP31240 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PdgfbP31240 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PdgfbP31240 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
PdgfbP31240 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
PdgfbP31240 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
PdgfbP31240 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
PdgfbP31240 Gm6916-202ENSMUST00000205523 195 ntBASIC14.76□□□□□ -0.05
PdgfbP31240 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PdgfbP31240 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PdgfbP31240 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PdgfbP31240 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PdgfbP31240 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
PdgfbP31240 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PdgfbP31240 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PdgfbP31240 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PdgfbP31240 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PdgfbP31240 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PdgfbP31240 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PdgfbP31240 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PdgfbP31240 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.75□□□□□ -0.05
PdgfbP31240 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PdgfbP31240 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PdgfbP31240 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.75□□□□□ -0.05
PdgfbP31240 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PdgfbP31240 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PdgfbP31240 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PdgfbP31240 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.75□□□□□ -0.05
PdgfbP31240 Gm45841-201ENSMUST00000207700 164 ntBASIC14.75□□□□□ -0.05
PdgfbP31240 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PdgfbP31240 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.75□□□□□ -0.05
PdgfbP31240 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PdgfbP31240 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms