Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Pde6bP23440 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pde6bP23440 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.23■□□□□ 0.19
Pde6bP23440 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pde6bP23440 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pde6bP23440 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.23■□□□□ 0.19
Pde6bP23440 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pde6bP23440 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pde6bP23440 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pde6bP23440 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pde6bP23440 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pde6bP23440 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.23■□□□□ 0.19
Pde6bP23440 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pde6bP23440 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pde6bP23440 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pde6bP23440 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pde6bP23440 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pde6bP23440 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pde6bP23440 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Pde6bP23440 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pde6bP23440 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.22■□□□□ 0.19
Pde6bP23440 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pde6bP23440 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pde6bP23440 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.22■□□□□ 0.19
Pde6bP23440 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Pde6bP23440 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.22■□□□□ 0.19
Pde6bP23440 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Pde6bP23440 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pde6bP23440 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.22■□□□□ 0.19
Pde6bP23440 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.22■□□□□ 0.19
Pde6bP23440 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pde6bP23440 Gm16026-204ENSMUST00000162652 683 ntBASIC16.22■□□□□ 0.19
Pde6bP23440 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pde6bP23440 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pde6bP23440 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Pde6bP23440 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Pde6bP23440 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pde6bP23440 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pde6bP23440 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Pde6bP23440 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.22■□□□□ 0.19
Pde6bP23440 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Pde6bP23440 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.22■□□□□ 0.19
Pde6bP23440 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pde6bP23440 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pde6bP23440 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pde6bP23440 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pde6bP23440 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pde6bP23440 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.21■□□□□ 0.19
Pde6bP23440 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Pde6bP23440 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pde6bP23440 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.21■□□□□ 0.19
Pde6bP23440 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pde6bP23440 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pde6bP23440 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Pde6bP23440 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.21■□□□□ 0.19
Pde6bP23440 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pde6bP23440 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.21■□□□□ 0.19
Pde6bP23440 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.21■□□□□ 0.19
Pde6bP23440 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.21■□□□□ 0.19
Pde6bP23440 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pde6bP23440 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Pde6bP23440 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pde6bP23440 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pde6bP23440 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Pde6bP23440 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pde6bP23440 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.21■□□□□ 0.19
Pde6bP23440 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pde6bP23440 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.21■□□□□ 0.19
Pde6bP23440 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.18
Pde6bP23440 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pde6bP23440 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.2■□□□□ 0.18
Pde6bP23440 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pde6bP23440 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pde6bP23440 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pde6bP23440 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pde6bP23440 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pde6bP23440 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pde6bP23440 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pde6bP23440 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pde6bP23440 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.2■□□□□ 0.18
Pde6bP23440 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Pde6bP23440 Gm27622-201ENSMUST00000183779 60 ntBASIC16.2■□□□□ 0.18
Pde6bP23440 Gm5779-201ENSMUST00000218467 910 ntBASIC16.2■□□□□ 0.18
Pde6bP23440 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pde6bP23440 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pde6bP23440 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pde6bP23440 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pde6bP23440 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pde6bP23440 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pde6bP23440 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pde6bP23440 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pde6bP23440 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pde6bP23440 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.2■□□□□ 0.18
Pde6bP23440 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Pde6bP23440 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pde6bP23440 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pde6bP23440 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pde6bP23440 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pde6bP23440 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pde6bP23440 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms