Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
BdnfP21237 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BdnfP21237 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
BdnfP21237 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BdnfP21237 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BdnfP21237 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BdnfP21237 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
BdnfP21237 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
BdnfP21237 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BdnfP21237 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BdnfP21237 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.26□□□□□ -0.13
BdnfP21237 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
BdnfP21237 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
BdnfP21237 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
BdnfP21237 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
BdnfP21237 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
BdnfP21237 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BdnfP21237 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BdnfP21237 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BdnfP21237 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
BdnfP21237 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
BdnfP21237 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
BdnfP21237 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BdnfP21237 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
BdnfP21237 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BdnfP21237 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
BdnfP21237 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
BdnfP21237 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
BdnfP21237 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BdnfP21237 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
BdnfP21237 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BdnfP21237 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BdnfP21237 Gm27646-201ENSMUST00000183989 110 ntBASIC14.25□□□□□ -0.13
BdnfP21237 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.25□□□□□ -0.13
BdnfP21237 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.25□□□□□ -0.13
BdnfP21237 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.25□□□□□ -0.13
BdnfP21237 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
BdnfP21237 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BdnfP21237 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BdnfP21237 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
BdnfP21237 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BdnfP21237 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BdnfP21237 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
BdnfP21237 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
BdnfP21237 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BdnfP21237 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BdnfP21237 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
BdnfP21237 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BdnfP21237 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BdnfP21237 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BdnfP21237 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
BdnfP21237 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BdnfP21237 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
BdnfP21237 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
BdnfP21237 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BdnfP21237 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BdnfP21237 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BdnfP21237 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.24□□□□□ -0.13
BdnfP21237 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.24□□□□□ -0.13
BdnfP21237 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
BdnfP21237 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.24□□□□□ -0.13
BdnfP21237 Gm6296-201ENSMUST00000222599 943 ntBASIC14.24□□□□□ -0.13
BdnfP21237 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
BdnfP21237 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.24□□□□□ -0.13
BdnfP21237 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BdnfP21237 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BdnfP21237 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BdnfP21237 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
BdnfP21237 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BdnfP21237 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BdnfP21237 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
BdnfP21237 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BdnfP21237 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.24□□□□□ -0.13
BdnfP21237 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
BdnfP21237 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
BdnfP21237 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BdnfP21237 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BdnfP21237 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
BdnfP21237 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
BdnfP21237 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.24□□□□□ -0.13
BdnfP21237 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
BdnfP21237 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BdnfP21237 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
BdnfP21237 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BdnfP21237 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BdnfP21237 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
BdnfP21237 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BdnfP21237 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.23□□□□□ -0.13
BdnfP21237 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BdnfP21237 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
BdnfP21237 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BdnfP21237 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BdnfP21237 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BdnfP21237 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BdnfP21237 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
BdnfP21237 Gm11780-201ENSMUST00000136880 516 ntBASIC14.23□□□□□ -0.13
BdnfP21237 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
BdnfP21237 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.23□□□□□ -0.13
BdnfP21237 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BdnfP21237 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms