Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.94□□□□□ -0.34
UbbP0CG49 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
UbbP0CG49 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UbbP0CG49 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.94□□□□□ -0.34
UbbP0CG49 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UbbP0CG49 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
UbbP0CG49 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
UbbP0CG49 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
UbbP0CG49 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.94□□□□□ -0.34
UbbP0CG49 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UbbP0CG49 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
UbbP0CG49 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
UbbP0CG49 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UbbP0CG49 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UbbP0CG49 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
UbbP0CG49 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UbbP0CG49 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UbbP0CG49 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UbbP0CG49 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
UbbP0CG49 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
UbbP0CG49 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UbbP0CG49 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UbbP0CG49 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UbbP0CG49 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
UbbP0CG49 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
UbbP0CG49 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UbbP0CG49 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.93□□□□□ -0.34
UbbP0CG49 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
UbbP0CG49 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UbbP0CG49 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UbbP0CG49 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UbbP0CG49 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UbbP0CG49 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
UbbP0CG49 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.93□□□□□ -0.34
UbbP0CG49 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
UbbP0CG49 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UbbP0CG49 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UbbP0CG49 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
UbbP0CG49 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UbbP0CG49 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UbbP0CG49 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.93□□□□□ -0.34
UbbP0CG49 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
UbbP0CG49 Gm27867-201ENSMUST00000184778 125 ntBASIC12.93□□□□□ -0.34
UbbP0CG49 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UbbP0CG49 Gm7506-201ENSMUST00000207758 815 ntBASIC12.93□□□□□ -0.34
UbbP0CG49 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.93□□□□□ -0.34
UbbP0CG49 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UbbP0CG49 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
UbbP0CG49 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.93□□□□□ -0.34
UbbP0CG49 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UbbP0CG49 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UbbP0CG49 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
UbbP0CG49 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UbbP0CG49 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UbbP0CG49 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.93□□□□□ -0.34
UbbP0CG49 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
UbbP0CG49 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
UbbP0CG49 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.93□□□□□ -0.34
UbbP0CG49 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
UbbP0CG49 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UbbP0CG49 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UbbP0CG49 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UbbP0CG49 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.92□□□□□ -0.34
UbbP0CG49 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
UbbP0CG49 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UbbP0CG49 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
UbbP0CG49 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UbbP0CG49 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UbbP0CG49 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UbbP0CG49 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.92□□□□□ -0.34
UbbP0CG49 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
UbbP0CG49 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UbbP0CG49 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.92□□□□□ -0.34
UbbP0CG49 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UbbP0CG49 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UbbP0CG49 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
UbbP0CG49 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
UbbP0CG49 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UbbP0CG49 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UbbP0CG49 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
UbbP0CG49 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UbbP0CG49 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UbbP0CG49 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
UbbP0CG49 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UbbP0CG49 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UbbP0CG49 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.92□□□□□ -0.34
UbbP0CG49 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UbbP0CG49 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UbbP0CG49 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UbbP0CG49 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.91□□□□□ -0.34
UbbP0CG49 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
UbbP0CG49 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UbbP0CG49 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.91□□□□□ -0.34
UbbP0CG49 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UbbP0CG49 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
UbbP0CG49 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
UbbP0CG49 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UbbP0CG49 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
UbbP0CG49 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
UbbP0CG49 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms