Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC19.14■□□□□ 0.65
Hoxc9P09633 Gm43352-201ENSMUST00000196419 3065 ntBASIC19.14■□□□□ 0.65
Hoxc9P09633 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxc9P09633 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxc9P09633 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxc9P09633 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxc9P09633 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxc9P09633 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxc9P09633 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Hoxc9P09633 Gm45751-201ENSMUST00000210185 1573 ntBASIC19.14■□□□□ 0.65
Hoxc9P09633 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxc9P09633 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Hoxc9P09633 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxc9P09633 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxc9P09633 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxc9P09633 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxc9P09633 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxc9P09633 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxc9P09633 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Hoxc9P09633 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxc9P09633 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxc9P09633 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Hoxc9P09633 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxc9P09633 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Hoxc9P09633 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Hoxc9P09633 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC19.13■□□□□ 0.65
Hoxc9P09633 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxc9P09633 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxc9P09633 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxc9P09633 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Hoxc9P09633 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxc9P09633 BC001981-202ENSMUST00000191393 1545 ntBASIC19.13■□□□□ 0.65
Hoxc9P09633 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxc9P09633 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxc9P09633 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Hoxc9P09633 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxc9P09633 AC133083.1-201ENSMUST00000221736 2209 ntBASIC19.13■□□□□ 0.65
Hoxc9P09633 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Hoxc9P09633 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Hoxc9P09633 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxc9P09633 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxc9P09633 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Hoxc9P09633 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxc9P09633 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxc9P09633 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxc9P09633 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxc9P09633 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Hoxc9P09633 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxc9P09633 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxc9P09633 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Hoxc9P09633 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxc9P09633 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Hoxc9P09633 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxc9P09633 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxc9P09633 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxc9P09633 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxc9P09633 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC19.12■□□□□ 0.65
Hoxc9P09633 Gm6745-201ENSMUST00000199216 526 ntBASIC19.12■□□□□ 0.65
Hoxc9P09633 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC19.12■□□□□ 0.65
Hoxc9P09633 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC19.12■□□□□ 0.65
Hoxc9P09633 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC19.12■□□□□ 0.65
Hoxc9P09633 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC19.12■□□□□ 0.65
Hoxc9P09633 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxc9P09633 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxc9P09633 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxc9P09633 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC19.12■□□□□ 0.65
Hoxc9P09633 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxc9P09633 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC19.12■□□□□ 0.65
Hoxc9P09633 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxc9P09633 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxc9P09633 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxc9P09633 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxc9P09633 Gm15163-201ENSMUST00000120749 1302 ntBASIC19.11■□□□□ 0.65
Hoxc9P09633 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
Hoxc9P09633 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxc9P09633 Gm12138-201ENSMUST00000122180 951 ntBASIC19.11■□□□□ 0.65
Hoxc9P09633 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Hoxc9P09633 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxc9P09633 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC19.11■□□□□ 0.65
Hoxc9P09633 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxc9P09633 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxc9P09633 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxc9P09633 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
Hoxc9P09633 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC19.11■□□□□ 0.65
Hoxc9P09633 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxc9P09633 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxc9P09633 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxc9P09633 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxc9P09633 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxc9P09633 BC037039-201ENSMUST00000192003 2205 ntBASIC19.1■□□□□ 0.65
Hoxc9P09633 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC19.1■□□□□ 0.65
Hoxc9P09633 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxc9P09633 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Hoxc9P09633 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxc9P09633 Gm5763-201ENSMUST00000155951 1530 ntBASIC19.1■□□□□ 0.65
Hoxc9P09633 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Hoxc9P09633 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Hoxc9P09633 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Hoxc9P09633 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxc9P09633 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms