Protein–RNA interactions for Protein: P09084

Pax1, Paired box protein Pax-1, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pax1P09084 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pax1P09084 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pax1P09084 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pax1P09084 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pax1P09084 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pax1P09084 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pax1P09084 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pax1P09084 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pax1P09084 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pax1P09084 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pax1P09084 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pax1P09084 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pax1P09084 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.1□□□□□ -0.47
Pax1P09084 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.1□□□□□ -0.47
Pax1P09084 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pax1P09084 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.1□□□□□ -0.47
Pax1P09084 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pax1P09084 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pax1P09084 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.1□□□□□ -0.47
Pax1P09084 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pax1P09084 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pax1P09084 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pax1P09084 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Pax1P09084 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pax1P09084 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pax1P09084 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pax1P09084 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pax1P09084 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.1□□□□□ -0.47
Pax1P09084 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pax1P09084 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pax1P09084 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pax1P09084 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pax1P09084 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pax1P09084 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pax1P09084 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Pax1P09084 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.09□□□□□ -0.47
Pax1P09084 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.09□□□□□ -0.47
Pax1P09084 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pax1P09084 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Pax1P09084 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.09□□□□□ -0.47
Pax1P09084 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.09□□□□□ -0.47
Pax1P09084 Gm8344-201ENSMUST00000119813 856 ntBASIC12.09□□□□□ -0.47
Pax1P09084 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.09□□□□□ -0.47
Pax1P09084 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Pax1P09084 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC12.09□□□□□ -0.47
Pax1P09084 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.09□□□□□ -0.47
Pax1P09084 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pax1P09084 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.09□□□□□ -0.47
Pax1P09084 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pax1P09084 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.09□□□□□ -0.47
Pax1P09084 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pax1P09084 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pax1P09084 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pax1P09084 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pax1P09084 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pax1P09084 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pax1P09084 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pax1P09084 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Pax1P09084 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pax1P09084 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Pax1P09084 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.08□□□□□ -0.48
Pax1P09084 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Pax1P09084 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pax1P09084 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pax1P09084 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pax1P09084 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pax1P09084 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pax1P09084 Gm27742-201ENSMUST00000184667 60 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms