Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04224 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04224 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04224 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04224 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04224 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04224 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04224 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
P04224 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.07□□□□□ -0.32
P04224 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04224 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04224 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04224 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04224 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P04224 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04224 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04224 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P04224 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.06□□□□□ -0.32
P04224 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04224 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04224 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.06□□□□□ -0.32
P04224 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.06□□□□□ -0.32
P04224 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04224 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04224 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04224 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04224 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04224 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P04224 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P04224 Gm6623-201ENSMUST00000173570 544 ntBASIC13.06□□□□□ -0.32
P04224 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04224 Gm9987-201ENSMUST00000069768 567 ntBASIC13.06□□□□□ -0.32
P04224 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
P04224 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04224 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04224 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P04224 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04224 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.06□□□□□ -0.32
P04224 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P04224 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04224 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
P04224 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.06□□□□□ -0.32
P04224 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
P04224 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
P04224 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
P04224 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04224 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04224 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04224 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04224 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
P04224 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04224 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04224 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04224 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04224 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
P04224 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04224 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.05□□□□□ -0.32
P04224 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
P04224 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04224 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
P04224 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04224 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04224 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04224 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04224 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04224 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04224 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
P04224 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04224 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04224 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
P04224 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04224 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04224 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04224 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
P04224 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P04224 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P04224 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04224 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P04224 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04224 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.04□□□□□ -0.32
P04224 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
P04224 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04224 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04224 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.04□□□□□ -0.32
P04224 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04224 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04224 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04224 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04224 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
P04224 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04224 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04224 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
P04224 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P04224 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.04□□□□□ -0.32
P04224 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04224 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04224 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
P04224 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04224 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04224 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms