Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.19■□□□□ 0.02
P01878 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.19■□□□□ 0.02
P01878 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
P01878 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.19■□□□□ 0.02
P01878 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P01878 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.19■□□□□ 0.02
P01878 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P01878 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
P01878 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
P01878 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P01878 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
P01878 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P01878 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P01878 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.19■□□□□ 0.02
P01878 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.19■□□□□ 0.02
P01878 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
P01878 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P01878 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
P01878 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
P01878 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P01878 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P01878 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P01878 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P01878 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
P01878 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
P01878 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01878 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01878 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01878 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01878 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.18■□□□□ 0.02
P01878 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
P01878 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01878 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01878 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01878 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01878 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.18■□□□□ 0.02
P01878 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC15.18■□□□□ 0.02
P01878 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.18■□□□□ 0.02
P01878 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
P01878 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.18■□□□□ 0.02
P01878 Gm42612-201ENSMUST00000197986 623 ntBASIC15.18■□□□□ 0.02
P01878 Gm43170-201ENSMUST00000199827 612 ntBASIC15.18■□□□□ 0.02
P01878 Gm9794-201ENSMUST00000202370 423 ntBASIC15.18■□□□□ 0.02
P01878 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.18■□□□□ 0.02
P01878 Gm7653-201ENSMUST00000214567 508 ntBASIC15.18■□□□□ 0.02
P01878 Gm9229-201ENSMUST00000222777 126 ntBASIC15.18■□□□□ 0.02
P01878 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.18■□□□□ 0.02
P01878 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01878 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01878 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01878 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01878 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01878 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
P01878 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
P01878 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
P01878 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
P01878 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01878 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P01878 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01878 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P01878 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01878 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01878 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01878 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01878 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P01878 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P01878 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01878 Gm14928-201ENSMUST00000120198 477 ntBASIC15.17■□□□□ 0.02
P01878 Gm12490-201ENSMUST00000120255 560 ntBASIC15.17■□□□□ 0.02
P01878 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.17■□□□□ 0.02
P01878 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01878 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P01878 Gm9522-201ENSMUST00000182394 926 ntBASIC15.17■□□□□ 0.02
P01878 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.17■□□□□ 0.02
P01878 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.17■□□□□ 0.02
P01878 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
P01878 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P01878 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
P01878 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P01878 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P01878 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.17■□□□□ 0.02
P01878 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01878 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01878 Gm20445-201ENSMUST00000061905 565 ntBASIC15.17■□□□□ 0.02
P01878 Mir125a-201ENSMUST00000083545 68 ntBASIC15.17■□□□□ 0.02
P01878 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01878 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
P01878 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01878 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01878 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P01878 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
P01878 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01878 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P01878 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01878 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
P01878 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01878 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01878 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P01878 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.17■□□□□ 0.02
P01878 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms