Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Syn1O88935 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Syn1O88935 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Syn1O88935 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Syn1O88935 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Syn1O88935 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Syn1O88935 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Syn1O88935 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Syn1O88935 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Syn1O88935 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Syn1O88935 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Syn1O88935 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Syn1O88935 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Syn1O88935 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Syn1O88935 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Syn1O88935 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.23■□□□□ 0.03
Syn1O88935 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Syn1O88935 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Syn1O88935 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syn1O88935 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Syn1O88935 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syn1O88935 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syn1O88935 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Syn1O88935 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syn1O88935 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syn1O88935 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Syn1O88935 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Syn1O88935 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Syn1O88935 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.23■□□□□ 0.03
Syn1O88935 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Syn1O88935 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.23■□□□□ 0.03
Syn1O88935 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.23■□□□□ 0.03
Syn1O88935 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syn1O88935 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syn1O88935 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.23■□□□□ 0.03
Syn1O88935 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.23■□□□□ 0.03
Syn1O88935 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Syn1O88935 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syn1O88935 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Syn1O88935 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syn1O88935 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Syn1O88935 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syn1O88935 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syn1O88935 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syn1O88935 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syn1O88935 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.23■□□□□ 0.03
Syn1O88935 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Syn1O88935 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syn1O88935 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Syn1O88935 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syn1O88935 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syn1O88935 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syn1O88935 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Syn1O88935 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syn1O88935 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.22■□□□□ 0.03
Syn1O88935 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Syn1O88935 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syn1O88935 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syn1O88935 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syn1O88935 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.22■□□□□ 0.03
Syn1O88935 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syn1O88935 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.22■□□□□ 0.03
Syn1O88935 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.22■□□□□ 0.03
Syn1O88935 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Syn1O88935 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC15.22■□□□□ 0.03
Syn1O88935 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC15.22■□□□□ 0.03
Syn1O88935 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.22■□□□□ 0.03
Syn1O88935 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Syn1O88935 Gm3436-201ENSMUST00000179930 840 ntBASIC15.22■□□□□ 0.03
Syn1O88935 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Syn1O88935 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syn1O88935 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.22■□□□□ 0.03
Syn1O88935 Gm9797-201ENSMUST00000052902 613 ntBASIC15.22■□□□□ 0.03
Syn1O88935 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Syn1O88935 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Syn1O88935 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Syn1O88935 Olfr582-201ENSMUST00000098212 960 ntBASIC15.22■□□□□ 0.03
Syn1O88935 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syn1O88935 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syn1O88935 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syn1O88935 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Syn1O88935 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Syn1O88935 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syn1O88935 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Syn1O88935 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syn1O88935 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syn1O88935 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syn1O88935 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Syn1O88935 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.21■□□□□ 0.03
Syn1O88935 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syn1O88935 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syn1O88935 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Syn1O88935 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syn1O88935 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.21■□□□□ 0.03
Syn1O88935 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Syn1O88935 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.21■□□□□ 0.03
Syn1O88935 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syn1O88935 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.21■□□□□ 0.03
Syn1O88935 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Syn1O88935 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms