Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tulp3O88413 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tulp3O88413 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tulp3O88413 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Tulp3O88413 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tulp3O88413 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tulp3O88413 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tulp3O88413 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tulp3O88413 AA414768-201ENSMUST00000121924 1257 ntBASIC13.88□□□□□ -0.19
Tulp3O88413 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.88□□□□□ -0.19
Tulp3O88413 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tulp3O88413 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.88□□□□□ -0.19
Tulp3O88413 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.88□□□□□ -0.19
Tulp3O88413 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tulp3O88413 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tulp3O88413 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tulp3O88413 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tulp3O88413 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tulp3O88413 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.88□□□□□ -0.19
Tulp3O88413 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Tulp3O88413 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tulp3O88413 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Tulp3O88413 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tulp3O88413 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Tulp3O88413 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Tulp3O88413 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tulp3O88413 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tulp3O88413 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Tulp3O88413 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Tulp3O88413 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Tulp3O88413 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tulp3O88413 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Tulp3O88413 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.87□□□□□ -0.19
Tulp3O88413 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.87□□□□□ -0.19
Tulp3O88413 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tulp3O88413 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Tulp3O88413 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tulp3O88413 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tulp3O88413 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tulp3O88413 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Tulp3O88413 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.87□□□□□ -0.19
Tulp3O88413 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tulp3O88413 Gm10499-201ENSMUST00000174094 934 ntBASIC13.87□□□□□ -0.19
Tulp3O88413 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.87□□□□□ -0.19
Tulp3O88413 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Tulp3O88413 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.87□□□□□ -0.19
Tulp3O88413 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tulp3O88413 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tulp3O88413 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Tulp3O88413 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tulp3O88413 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tulp3O88413 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Tulp3O88413 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tulp3O88413 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Tulp3O88413 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Tulp3O88413 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.87□□□□□ -0.19
Tulp3O88413 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tulp3O88413 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Tulp3O88413 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tulp3O88413 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.87□□□□□ -0.19
Tulp3O88413 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tulp3O88413 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tulp3O88413 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Tulp3O88413 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tulp3O88413 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tulp3O88413 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tulp3O88413 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tulp3O88413 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tulp3O88413 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Tulp3O88413 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tulp3O88413 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tulp3O88413 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Tulp3O88413 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Tulp3O88413 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tulp3O88413 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tulp3O88413 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tulp3O88413 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.86□□□□□ -0.19
Tulp3O88413 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tulp3O88413 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.86□□□□□ -0.19
Tulp3O88413 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tulp3O88413 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.86□□□□□ -0.19
Tulp3O88413 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tulp3O88413 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tulp3O88413 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tulp3O88413 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tulp3O88413 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tulp3O88413 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tulp3O88413 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tulp3O88413 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tulp3O88413 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tulp3O88413 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.86□□□□□ -0.19
Tulp3O88413 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.86□□□□□ -0.19
Tulp3O88413 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tulp3O88413 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tulp3O88413 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Tulp3O88413 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tulp3O88413 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tulp3O88413 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Tulp3O88413 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tulp3O88413 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms