Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IkbkbO88351 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
IkbkbO88351 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IkbkbO88351 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.43■□□□□ 0.22
IkbkbO88351 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.43■□□□□ 0.22
IkbkbO88351 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IkbkbO88351 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.43■□□□□ 0.22
IkbkbO88351 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
IkbkbO88351 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IkbkbO88351 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IkbkbO88351 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IkbkbO88351 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
IkbkbO88351 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
IkbkbO88351 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
IkbkbO88351 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
IkbkbO88351 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
IkbkbO88351 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
IkbkbO88351 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IkbkbO88351 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IkbkbO88351 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IkbkbO88351 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IkbkbO88351 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.42■□□□□ 0.22
IkbkbO88351 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
IkbkbO88351 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.42■□□□□ 0.22
IkbkbO88351 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IkbkbO88351 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
IkbkbO88351 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IkbkbO88351 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
IkbkbO88351 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IkbkbO88351 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
IkbkbO88351 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
IkbkbO88351 Gm17271-201ENSMUST00000165535 355 ntBASIC16.42■□□□□ 0.22
IkbkbO88351 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IkbkbO88351 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IkbkbO88351 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IkbkbO88351 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IkbkbO88351 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IkbkbO88351 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IkbkbO88351 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IkbkbO88351 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IkbkbO88351 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
IkbkbO88351 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IkbkbO88351 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.42■□□□□ 0.22
IkbkbO88351 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IkbkbO88351 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IkbkbO88351 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
IkbkbO88351 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IkbkbO88351 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IkbkbO88351 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IkbkbO88351 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.42■□□□□ 0.22
IkbkbO88351 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
IkbkbO88351 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IkbkbO88351 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
IkbkbO88351 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
IkbkbO88351 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IkbkbO88351 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IkbkbO88351 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IkbkbO88351 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IkbkbO88351 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IkbkbO88351 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
IkbkbO88351 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.41■□□□□ 0.22
IkbkbO88351 Gm23935-201ENSMUST00000102303 57 ntBASIC16.41■□□□□ 0.22
IkbkbO88351 Gm24270-201ENSMUST00000102326 57 ntBASIC16.41■□□□□ 0.22
IkbkbO88351 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IkbkbO88351 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IkbkbO88351 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.41■□□□□ 0.22
IkbkbO88351 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.41■□□□□ 0.22
IkbkbO88351 Gm24245-201ENSMUST00000157318 57 ntBASIC16.41■□□□□ 0.22
IkbkbO88351 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
IkbkbO88351 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.41■□□□□ 0.22
IkbkbO88351 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
IkbkbO88351 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IkbkbO88351 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.41■□□□□ 0.22
IkbkbO88351 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IkbkbO88351 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IkbkbO88351 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IkbkbO88351 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IkbkbO88351 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
IkbkbO88351 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IkbkbO88351 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
IkbkbO88351 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IkbkbO88351 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IkbkbO88351 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IkbkbO88351 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IkbkbO88351 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IkbkbO88351 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IkbkbO88351 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IkbkbO88351 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IkbkbO88351 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
IkbkbO88351 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IkbkbO88351 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
IkbkbO88351 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IkbkbO88351 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IkbkbO88351 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IkbkbO88351 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.4■□□□□ 0.22
IkbkbO88351 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IkbkbO88351 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IkbkbO88351 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IkbkbO88351 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.4■□□□□ 0.22
IkbkbO88351 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms