Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.49□□□□□ -0.25
Rnf13O54965 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Rnf13O54965 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf13O54965 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf13O54965 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Rnf13O54965 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf13O54965 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Rnf13O54965 Gm12008-201ENSMUST00000117791 755 ntBASIC13.49□□□□□ -0.25
Rnf13O54965 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.49□□□□□ -0.25
Rnf13O54965 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf13O54965 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf13O54965 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf13O54965 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf13O54965 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.49□□□□□ -0.25
Rnf13O54965 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Rnf13O54965 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf13O54965 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf13O54965 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf13O54965 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf13O54965 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Rnf13O54965 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf13O54965 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Rnf13O54965 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf13O54965 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf13O54965 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf13O54965 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf13O54965 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf13O54965 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf13O54965 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf13O54965 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Rnf13O54965 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf13O54965 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf13O54965 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf13O54965 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf13O54965 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf13O54965 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf13O54965 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf13O54965 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf13O54965 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf13O54965 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf13O54965 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf13O54965 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.48□□□□□ -0.25
Rnf13O54965 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.48□□□□□ -0.25
Rnf13O54965 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.48□□□□□ -0.25
Rnf13O54965 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.48□□□□□ -0.25
Rnf13O54965 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.48□□□□□ -0.25
Rnf13O54965 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.48□□□□□ -0.25
Rnf13O54965 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf13O54965 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf13O54965 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf13O54965 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.48□□□□□ -0.25
Rnf13O54965 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf13O54965 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Rnf13O54965 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf13O54965 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf13O54965 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf13O54965 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf13O54965 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf13O54965 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf13O54965 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf13O54965 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf13O54965 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf13O54965 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf13O54965 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf13O54965 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf13O54965 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf13O54965 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf13O54965 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf13O54965 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf13O54965 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.47□□□□□ -0.25
Rnf13O54965 Gm15372-201ENSMUST00000120729 834 ntBASIC13.47□□□□□ -0.25
Rnf13O54965 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Rnf13O54965 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf13O54965 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf13O54965 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf13O54965 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Rnf13O54965 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf13O54965 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.47□□□□□ -0.25
Rnf13O54965 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf13O54965 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Rnf13O54965 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf13O54965 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf13O54965 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf13O54965 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf13O54965 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf13O54965 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Rnf13O54965 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf13O54965 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf13O54965 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf13O54965 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf13O54965 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf13O54965 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf13O54965 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf13O54965 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Rnf13O54965 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf13O54965 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf13O54965 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf13O54965 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf13O54965 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf13O54965 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 10 ms