Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
DffbO54788 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
DffbO54788 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
DffbO54788 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
DffbO54788 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DffbO54788 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DffbO54788 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
DffbO54788 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
DffbO54788 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DffbO54788 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DffbO54788 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.78□□□□□ -0.36
DffbO54788 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.78□□□□□ -0.36
DffbO54788 Gm12895-201ENSMUST00000122214 226 ntBASIC12.78□□□□□ -0.36
DffbO54788 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.78□□□□□ -0.36
DffbO54788 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
DffbO54788 Gm27357-201ENSMUST00000183754 135 ntBASIC12.78□□□□□ -0.36
DffbO54788 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.78□□□□□ -0.36
DffbO54788 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.78□□□□□ -0.36
DffbO54788 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
DffbO54788 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
DffbO54788 Gm10819-201ENSMUST00000099988 561 ntBASIC12.78□□□□□ -0.36
DffbO54788 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
DffbO54788 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
DffbO54788 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
DffbO54788 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DffbO54788 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
DffbO54788 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
DffbO54788 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DffbO54788 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
DffbO54788 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DffbO54788 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DffbO54788 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
DffbO54788 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DffbO54788 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
DffbO54788 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
DffbO54788 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DffbO54788 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DffbO54788 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
DffbO54788 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DffbO54788 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
DffbO54788 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
DffbO54788 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DffbO54788 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DffbO54788 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DffbO54788 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
DffbO54788 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
DffbO54788 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
DffbO54788 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
DffbO54788 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
DffbO54788 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
DffbO54788 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
DffbO54788 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
DffbO54788 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
DffbO54788 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DffbO54788 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
DffbO54788 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
DffbO54788 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
DffbO54788 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.77□□□□□ -0.37
DffbO54788 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.77□□□□□ -0.37
DffbO54788 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
DffbO54788 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.77□□□□□ -0.37
DffbO54788 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
DffbO54788 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DffbO54788 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DffbO54788 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DffbO54788 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DffbO54788 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DffbO54788 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DffbO54788 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
DffbO54788 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DffbO54788 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DffbO54788 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DffbO54788 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DffbO54788 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
DffbO54788 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DffbO54788 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
DffbO54788 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
DffbO54788 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
DffbO54788 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
DffbO54788 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.76□□□□□ -0.37
DffbO54788 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
DffbO54788 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
DffbO54788 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
DffbO54788 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
DffbO54788 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
DffbO54788 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DffbO54788 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
DffbO54788 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
DffbO54788 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DffbO54788 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DffbO54788 Gm27646-201ENSMUST00000183989 110 ntBASIC12.76□□□□□ -0.37
DffbO54788 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.76□□□□□ -0.37
DffbO54788 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DffbO54788 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DffbO54788 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
DffbO54788 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DffbO54788 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DffbO54788 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DffbO54788 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
DffbO54788 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms