Protein–RNA interactions for Protein: O54743

Foxf2, Forkhead box protein F2, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf2O54743 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Foxf2O54743 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Foxf2O54743 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Foxf2O54743 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Foxf2O54743 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Foxf2O54743 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Foxf2O54743 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Foxf2O54743 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxf2O54743 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Foxf2O54743 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.52□□□□□ -0.41
Foxf2O54743 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Foxf2O54743 Gm4995-201ENSMUST00000117247 432 ntBASIC12.52□□□□□ -0.41
Foxf2O54743 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Foxf2O54743 Gm25911-201ENSMUST00000157621 56 ntBASIC12.52□□□□□ -0.41
Foxf2O54743 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.52□□□□□ -0.41
Foxf2O54743 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.52□□□□□ -0.41
Foxf2O54743 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.52□□□□□ -0.41
Foxf2O54743 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxf2O54743 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxf2O54743 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxf2O54743 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxf2O54743 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxf2O54743 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.52□□□□□ -0.41
Foxf2O54743 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Foxf2O54743 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Foxf2O54743 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Foxf2O54743 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Foxf2O54743 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxf2O54743 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxf2O54743 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxf2O54743 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxf2O54743 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxf2O54743 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Foxf2O54743 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxf2O54743 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxf2O54743 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.51□□□□□ -0.41
Foxf2O54743 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Foxf2O54743 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Foxf2O54743 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Foxf2O54743 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.51□□□□□ -0.41
Foxf2O54743 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.51□□□□□ -0.41
Foxf2O54743 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.51□□□□□ -0.41
Foxf2O54743 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.51□□□□□ -0.41
Foxf2O54743 Rpph1-201ENSMUST00000175096 319 ntBASIC12.51□□□□□ -0.41
Foxf2O54743 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.51□□□□□ -0.41
Foxf2O54743 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxf2O54743 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.51□□□□□ -0.41
Foxf2O54743 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.51□□□□□ -0.41
Foxf2O54743 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxf2O54743 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Foxf2O54743 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxf2O54743 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxf2O54743 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.51□□□□□ -0.41
Foxf2O54743 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxf2O54743 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxf2O54743 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.51□□□□□ -0.41
Foxf2O54743 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxf2O54743 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxf2O54743 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxf2O54743 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Foxf2O54743 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Foxf2O54743 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxf2O54743 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxf2O54743 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Foxf2O54743 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxf2O54743 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxf2O54743 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Foxf2O54743 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxf2O54743 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxf2O54743 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxf2O54743 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxf2O54743 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxf2O54743 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxf2O54743 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxf2O54743 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxf2O54743 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.5□□□□□ -0.41
Foxf2O54743 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Foxf2O54743 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.5□□□□□ -0.41
Foxf2O54743 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Foxf2O54743 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxf2O54743 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxf2O54743 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.5□□□□□ -0.41
Foxf2O54743 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.5□□□□□ -0.41
Foxf2O54743 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.5□□□□□ -0.41
Foxf2O54743 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxf2O54743 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.5□□□□□ -0.41
Foxf2O54743 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxf2O54743 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Foxf2O54743 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.5□□□□□ -0.41
Foxf2O54743 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxf2O54743 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxf2O54743 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxf2O54743 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Foxf2O54743 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxf2O54743 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
Foxf2O54743 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxf2O54743 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxf2O54743 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxf2O54743 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxf2O54743 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms