Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Gm45293-201ENSMUST00000209754 1812 ntBASIC11.76□□□□□ -0.53
Efnb3O35393 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Efnb3O35393 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Efnb3O35393 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Efnb3O35393 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Efnb3O35393 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Efnb3O35393 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Efnb3O35393 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Efnb3O35393 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.76□□□□□ -0.53
Efnb3O35393 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Efnb3O35393 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Efnb3O35393 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Efnb3O35393 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Efnb3O35393 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Efnb3O35393 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Efnb3O35393 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Efnb3O35393 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC11.76□□□□□ -0.53
Efnb3O35393 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Efnb3O35393 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Efnb3O35393 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Efnb3O35393 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC11.76□□□□□ -0.53
Efnb3O35393 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Efnb3O35393 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Efnb3O35393 CT009510.1-201ENSMUST00000227972 270 ntBASIC11.76□□□□□ -0.53
Efnb3O35393 Otx2os1-206ENSMUST00000228153 787 ntBASIC11.76□□□□□ -0.53
Efnb3O35393 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Efnb3O35393 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Efnb3O35393 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Efnb3O35393 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Efnb3O35393 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Efnb3O35393 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.76□□□□□ -0.53
Efnb3O35393 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Efnb3O35393 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Efnb3O35393 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Efnb3O35393 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Efnb3O35393 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Efnb3O35393 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Efnb3O35393 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Efnb3O35393 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Efnb3O35393 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Efnb3O35393 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Efnb3O35393 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Efnb3O35393 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Efnb3O35393 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Efnb3O35393 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Efnb3O35393 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Efnb3O35393 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Efnb3O35393 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Efnb3O35393 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC11.75□□□□□ -0.53
Efnb3O35393 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Efnb3O35393 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC11.75□□□□□ -0.53
Efnb3O35393 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC11.75□□□□□ -0.53
Efnb3O35393 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Efnb3O35393 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Efnb3O35393 Gm44454-201ENSMUST00000198541 138 ntBASIC11.75□□□□□ -0.53
Efnb3O35393 Gm18622-201ENSMUST00000219361 595 ntBASIC11.75□□□□□ -0.53
Efnb3O35393 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC11.75□□□□□ -0.53
Efnb3O35393 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Efnb3O35393 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Efnb3O35393 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Efnb3O35393 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Efnb3O35393 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Efnb3O35393 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Efnb3O35393 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Efnb3O35393 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Efnb3O35393 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Efnb3O35393 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Efnb3O35393 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Efnb3O35393 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Efnb3O35393 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Efnb3O35393 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Efnb3O35393 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Efnb3O35393 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Efnb3O35393 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Efnb3O35393 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Efnb3O35393 Gm21009-201ENSMUST00000197169 1669 ntBASIC11.75□□□□□ -0.53
Efnb3O35393 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Efnb3O35393 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Efnb3O35393 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Efnb3O35393 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.74□□□□□ -0.53
Efnb3O35393 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Efnb3O35393 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Efnb3O35393 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Efnb3O35393 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Efnb3O35393 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Efnb3O35393 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Efnb3O35393 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Efnb3O35393 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Efnb3O35393 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Efnb3O35393 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Efnb3O35393 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Efnb3O35393 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Efnb3O35393 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Efnb3O35393 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC11.74□□□□□ -0.53
Efnb3O35393 Olfr129-201ENSMUST00000122318 993 ntBASIC11.74□□□□□ -0.53
Efnb3O35393 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.74□□□□□ -0.53
Efnb3O35393 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Efnb3O35393 Mir3081-201ENSMUST00000175305 84 ntBASIC11.74□□□□□ -0.53
Efnb3O35393 Gm8318-201ENSMUST00000182954 872 ntBASIC11.74□□□□□ -0.53
Efnb3O35393 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms