Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.2■□□□□ 0.02
Ercc2O08811 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.2■□□□□ 0.02
Ercc2O08811 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.2■□□□□ 0.02
Ercc2O08811 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ercc2O08811 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ercc2O08811 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ercc2O08811 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ercc2O08811 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ercc2O08811 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ercc2O08811 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ercc2O08811 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ercc2O08811 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ercc2O08811 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ercc2O08811 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ercc2O08811 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ercc2O08811 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ercc2O08811 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ercc2O08811 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ercc2O08811 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc2O08811 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc2O08811 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.19■□□□□ 0.02
Ercc2O08811 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.19■□□□□ 0.02
Ercc2O08811 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc2O08811 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc2O08811 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
Ercc2O08811 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc2O08811 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ercc2O08811 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.19■□□□□ 0.02
Ercc2O08811 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc2O08811 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc2O08811 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Ercc2O08811 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc2O08811 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc2O08811 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc2O08811 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Ercc2O08811 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc2O08811 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ercc2O08811 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc2O08811 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc2O08811 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc2O08811 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc2O08811 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc2O08811 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.19■□□□□ 0.02
Ercc2O08811 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.19■□□□□ 0.02
Ercc2O08811 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.19■□□□□ 0.02
Ercc2O08811 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc2O08811 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ercc2O08811 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ercc2O08811 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc2O08811 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc2O08811 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc2O08811 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc2O08811 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc2O08811 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc2O08811 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc2O08811 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc2O08811 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.19■□□□□ 0.02
Ercc2O08811 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc2O08811 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ercc2O08811 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ercc2O08811 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ercc2O08811 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ercc2O08811 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ercc2O08811 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ercc2O08811 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ercc2O08811 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ercc2O08811 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Ercc2O08811 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ercc2O08811 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.18■□□□□ 0.02
Ercc2O08811 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.18■□□□□ 0.02
Ercc2O08811 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ercc2O08811 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ercc2O08811 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ercc2O08811 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ercc2O08811 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ercc2O08811 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.18■□□□□ 0.02
Ercc2O08811 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ercc2O08811 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ercc2O08811 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ercc2O08811 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ercc2O08811 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ercc2O08811 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ercc2O08811 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ercc2O08811 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ercc2O08811 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ercc2O08811 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ercc2O08811 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Ercc2O08811 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.17■□□□□ 0.02
Ercc2O08811 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc2O08811 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc2O08811 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ercc2O08811 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc2O08811 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ercc2O08811 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.17■□□□□ 0.02
Ercc2O08811 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc2O08811 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc2O08811 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc2O08811 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc2O08811 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc2O08811 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms