Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh9F8VPK8 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh9F8VPK8 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdh9F8VPK8 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh9F8VPK8 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh9F8VPK8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.24■□□□□ 0.03
Pcdh9F8VPK8 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdh9F8VPK8 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh9F8VPK8 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh9F8VPK8 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh9F8VPK8 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh9F8VPK8 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.24■□□□□ 0.03
Pcdh9F8VPK8 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh9F8VPK8 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh9F8VPK8 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh9F8VPK8 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh9F8VPK8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh9F8VPK8 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh9F8VPK8 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh9F8VPK8 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh9F8VPK8 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh9F8VPK8 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh9F8VPK8 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh9F8VPK8 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdh9F8VPK8 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Pcdh9F8VPK8 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh9F8VPK8 Gm7230-201ENSMUST00000173026 815 ntBASIC15.23■□□□□ 0.03
Pcdh9F8VPK8 Gm27741-201ENSMUST00000185060 237 ntBASIC15.23■□□□□ 0.03
Pcdh9F8VPK8 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh9F8VPK8 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh9F8VPK8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdh9F8VPK8 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh9F8VPK8 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh9F8VPK8 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Pcdh9F8VPK8 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh9F8VPK8 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.23■□□□□ 0.03
Pcdh9F8VPK8 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh9F8VPK8 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh9F8VPK8 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Pcdh9F8VPK8 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdh9F8VPK8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh9F8VPK8 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdh9F8VPK8 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Pcdh9F8VPK8 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Pcdh9F8VPK8 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh9F8VPK8 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh9F8VPK8 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.22■□□□□ 0.03
Pcdh9F8VPK8 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.22■□□□□ 0.03
Pcdh9F8VPK8 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh9F8VPK8 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh9F8VPK8 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh9F8VPK8 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh9F8VPK8 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh9F8VPK8 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh9F8VPK8 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh9F8VPK8 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh9F8VPK8 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh9F8VPK8 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdh9F8VPK8 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdh9F8VPK8 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh9F8VPK8 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh9F8VPK8 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdh9F8VPK8 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh9F8VPK8 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdh9F8VPK8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh9F8VPK8 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh9F8VPK8 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Pcdh9F8VPK8 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh9F8VPK8 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
Pcdh9F8VPK8 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh9F8VPK8 Gm15173-201ENSMUST00000122049 433 ntBASIC15.21■□□□□ 0.03
Pcdh9F8VPK8 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdh9F8VPK8 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh9F8VPK8 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdh9F8VPK8 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdh9F8VPK8 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh9F8VPK8 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh9F8VPK8 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh9F8VPK8 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh9F8VPK8 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Pcdh9F8VPK8 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Pcdh9F8VPK8 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdh9F8VPK8 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.21■□□□□ 0.02
Pcdh9F8VPK8 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdh9F8VPK8 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdh9F8VPK8 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh9F8VPK8 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdh9F8VPK8 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pcdh9F8VPK8 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdh9F8VPK8 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh9F8VPK8 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh9F8VPK8 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh9F8VPK8 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh9F8VPK8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh9F8VPK8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh9F8VPK8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh9F8VPK8 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh9F8VPK8 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdh9F8VPK8 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh9F8VPK8 Gm6550-201ENSMUST00000187574 993 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms