Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a3E9PWQ3 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a3E9PWQ3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a3E9PWQ3 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.59□□□□□ -0.07
Col6a3E9PWQ3 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a3E9PWQ3 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a3E9PWQ3 AC124457.1-201ENSMUST00000198845 120 ntBASIC14.59□□□□□ -0.07
Col6a3E9PWQ3 Gm18584-201ENSMUST00000203098 964 ntBASIC14.59□□□□□ -0.07
Col6a3E9PWQ3 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.59□□□□□ -0.07
Col6a3E9PWQ3 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a3E9PWQ3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a3E9PWQ3 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a3E9PWQ3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a3E9PWQ3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a3E9PWQ3 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a3E9PWQ3 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Col6a3E9PWQ3 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Col6a3E9PWQ3 Gm22331-201ENSMUST00000158066 136 ntBASIC14.58□□□□□ -0.07
Col6a3E9PWQ3 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Col6a3E9PWQ3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.58□□□□□ -0.07
Col6a3E9PWQ3 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.58□□□□□ -0.07
Col6a3E9PWQ3 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Col6a3E9PWQ3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Col6a3E9PWQ3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col6a3E9PWQ3 BC001981-202ENSMUST00000191393 1545 ntBASIC14.58□□□□□ -0.08
Col6a3E9PWQ3 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col6a3E9PWQ3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col6a3E9PWQ3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Col6a3E9PWQ3 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14.58□□□□□ -0.08
Col6a3E9PWQ3 Gm4607-201ENSMUST00000206649 577 ntBASIC14.58□□□□□ -0.08
Col6a3E9PWQ3 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Col6a3E9PWQ3 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col6a3E9PWQ3 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Col6a3E9PWQ3 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Col6a3E9PWQ3 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.58□□□□□ -0.08
Col6a3E9PWQ3 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Col6a3E9PWQ3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col6a3E9PWQ3 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col6a3E9PWQ3 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.58□□□□□ -0.08
Col6a3E9PWQ3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col6a3E9PWQ3 Gm44551-201ENSMUST00000208804 171 ntBASIC14.58□□□□□ -0.08
Col6a3E9PWQ3 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.58□□□□□ -0.08
Col6a3E9PWQ3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col6a3E9PWQ3 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.58□□□□□ -0.08
Col6a3E9PWQ3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col6a3E9PWQ3 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col6a3E9PWQ3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a3E9PWQ3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a3E9PWQ3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.57□□□□□ -0.08
Col6a3E9PWQ3 Gm1335-201ENSMUST00000121653 386 ntBASIC14.57□□□□□ -0.08
Col6a3E9PWQ3 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.57□□□□□ -0.08
Col6a3E9PWQ3 Gm27438-201ENSMUST00000183480 110 ntBASIC14.57□□□□□ -0.08
Col6a3E9PWQ3 Gm45219-201ENSMUST00000205602 465 ntBASIC14.57□□□□□ -0.08
Col6a3E9PWQ3 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Col6a3E9PWQ3 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a3E9PWQ3 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a3E9PWQ3 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a3E9PWQ3 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a3E9PWQ3 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a3E9PWQ3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a3E9PWQ3 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a3E9PWQ3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.57□□□□□ -0.08
Col6a3E9PWQ3 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a3E9PWQ3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Gm4804-201ENSMUST00000182234 999 ntBASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Gm38671-201ENSMUST00000200573 130 ntBASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Gm21769-201ENSMUST00000211922 111 ntBASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Gm12241-201ENSMUST00000118330 726 ntBASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Gm2991-201ENSMUST00000173338 480 ntBASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.56□□□□□ -0.08
Col6a3E9PWQ3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.55□□□□□ -0.08
Col6a3E9PWQ3 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Col6a3E9PWQ3 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms