Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clip3B9EHT4 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Clip3B9EHT4 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clip3B9EHT4 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Clip3B9EHT4 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clip3B9EHT4 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clip3B9EHT4 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clip3B9EHT4 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
Clip3B9EHT4 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clip3B9EHT4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clip3B9EHT4 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clip3B9EHT4 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.42□□□□□ -0.1
Clip3B9EHT4 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.42□□□□□ -0.1
Clip3B9EHT4 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.42□□□□□ -0.1
Clip3B9EHT4 Gm13597-201ENSMUST00000121239 375 ntBASIC14.42□□□□□ -0.1
Clip3B9EHT4 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Clip3B9EHT4 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.42□□□□□ -0.1
Clip3B9EHT4 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clip3B9EHT4 Gm43575-201ENSMUST00000196420 516 ntBASIC14.42□□□□□ -0.1
Clip3B9EHT4 Gm44492-201ENSMUST00000197012 141 ntBASIC14.42□□□□□ -0.1
Clip3B9EHT4 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.42□□□□□ -0.1
Clip3B9EHT4 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.42□□□□□ -0.1
Clip3B9EHT4 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clip3B9EHT4 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Clip3B9EHT4 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clip3B9EHT4 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clip3B9EHT4 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clip3B9EHT4 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clip3B9EHT4 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.41□□□□□ -0.1
Clip3B9EHT4 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clip3B9EHT4 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip3B9EHT4 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip3B9EHT4 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip3B9EHT4 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.41□□□□□ -0.1
Clip3B9EHT4 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip3B9EHT4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip3B9EHT4 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip3B9EHT4 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip3B9EHT4 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip3B9EHT4 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Clip3B9EHT4 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip3B9EHT4 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip3B9EHT4 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clip3B9EHT4 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip3B9EHT4 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.41□□□□□ -0.1
Clip3B9EHT4 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip3B9EHT4 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Clip3B9EHT4 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip3B9EHT4 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip3B9EHT4 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Clip3B9EHT4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip3B9EHT4 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip3B9EHT4 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Clip3B9EHT4 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip3B9EHT4 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip3B9EHT4 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip3B9EHT4 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip3B9EHT4 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip3B9EHT4 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clip3B9EHT4 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clip3B9EHT4 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clip3B9EHT4 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.4□□□□□ -0.1
Clip3B9EHT4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clip3B9EHT4 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Clip3B9EHT4 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clip3B9EHT4 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clip3B9EHT4 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clip3B9EHT4 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clip3B9EHT4 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.4□□□□□ -0.1
Clip3B9EHT4 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Clip3B9EHT4 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.4□□□□□ -0.1
Clip3B9EHT4 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.4□□□□□ -0.1
Clip3B9EHT4 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Clip3B9EHT4 Gm25911-201ENSMUST00000157621 56 ntBASIC14.4□□□□□ -0.1
Clip3B9EHT4 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clip3B9EHT4 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
Clip3B9EHT4 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.4□□□□□ -0.1
Clip3B9EHT4 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clip3B9EHT4 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.4□□□□□ -0.1
Clip3B9EHT4 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clip3B9EHT4 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Clip3B9EHT4 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clip3B9EHT4 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clip3B9EHT4 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clip3B9EHT4 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clip3B9EHT4 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clip3B9EHT4 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.4□□□□□ -0.1
Clip3B9EHT4 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clip3B9EHT4 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clip3B9EHT4 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clip3B9EHT4 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Clip3B9EHT4 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Clip3B9EHT4 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clip3B9EHT4 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clip3B9EHT4 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clip3B9EHT4 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Clip3B9EHT4 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clip3B9EHT4 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clip3B9EHT4 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.39□□□□□ -0.11
Clip3B9EHT4 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms