Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clrn2B2RVW2 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC17.14■□□□□ 0.33
Clrn2B2RVW2 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clrn2B2RVW2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Clrn2B2RVW2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clrn2B2RVW2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clrn2B2RVW2 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clrn2B2RVW2 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Gm2451-201ENSMUST00000199447 999 ntBASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Gm10290-201ENSMUST00000200451 999 ntBASIC17.13■□□□□ 0.33
Clrn2B2RVW2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn2B2RVW2 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Clrn2B2RVW2 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clrn2B2RVW2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clrn2B2RVW2 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clrn2B2RVW2 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clrn2B2RVW2 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clrn2B2RVW2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clrn2B2RVW2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.12■□□□□ 0.33
Clrn2B2RVW2 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clrn2B2RVW2 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.12■□□□□ 0.33
Clrn2B2RVW2 Gm27631-201ENSMUST00000184163 466 ntBASIC17.12■□□□□ 0.33
Clrn2B2RVW2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC17.12■□□□□ 0.33
Clrn2B2RVW2 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC17.12■□□□□ 0.33
Clrn2B2RVW2 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Clrn2B2RVW2 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Clrn2B2RVW2 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clrn2B2RVW2 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.12■□□□□ 0.33
Clrn2B2RVW2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clrn2B2RVW2 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clrn2B2RVW2 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Clrn2B2RVW2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clrn2B2RVW2 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clrn2B2RVW2 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC17.12■□□□□ 0.33
Clrn2B2RVW2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clrn2B2RVW2 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clrn2B2RVW2 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clrn2B2RVW2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clrn2B2RVW2 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clrn2B2RVW2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clrn2B2RVW2 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.11■□□□□ 0.33
Clrn2B2RVW2 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Clrn2B2RVW2 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clrn2B2RVW2 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.11■□□□□ 0.33
Clrn2B2RVW2 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clrn2B2RVW2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clrn2B2RVW2 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clrn2B2RVW2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC17.11■□□□□ 0.33
Clrn2B2RVW2 Gm23984-201ENSMUST00000157139 203 ntBASIC17.11■□□□□ 0.33
Clrn2B2RVW2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clrn2B2RVW2 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.11■□□□□ 0.33
Clrn2B2RVW2 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC17.11■□□□□ 0.33
Clrn2B2RVW2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC17.11■□□□□ 0.33
Clrn2B2RVW2 Gm20445-201ENSMUST00000061905 565 ntBASIC17.11■□□□□ 0.33
Clrn2B2RVW2 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clrn2B2RVW2 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clrn2B2RVW2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clrn2B2RVW2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clrn2B2RVW2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Clrn2B2RVW2 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Clrn2B2RVW2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clrn2B2RVW2 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clrn2B2RVW2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clrn2B2RVW2 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms