Protein–RNA interactions for Protein: B2RT89

Slc22a28, Predicted gene, EG434674, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc22a28B2RT89 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Slc22a28B2RT89 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Slc22a28B2RT89 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Slc22a28B2RT89 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Slc22a28B2RT89 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Slc22a28B2RT89 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Slc22a28B2RT89 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Slc22a28B2RT89 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Slc22a28B2RT89 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Slc22a28B2RT89 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Slc22a28B2RT89 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Slc22a28B2RT89 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Slc22a28B2RT89 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Slc22a28B2RT89 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Slc22a28B2RT89 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Slc22a28B2RT89 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Slc22a28B2RT89 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Slc22a28B2RT89 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Slc22a28B2RT89 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Slc22a28B2RT89 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Slc22a28B2RT89 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Slc22a28B2RT89 Gm5682-201ENSMUST00000173402 505 ntBASIC13.71□□□□□ -0.21
Slc22a28B2RT89 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Slc22a28B2RT89 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Slc22a28B2RT89 Gm44357-201ENSMUST00000195897 142 ntBASIC13.71□□□□□ -0.21
Slc22a28B2RT89 Gm19658-201ENSMUST00000196231 138 ntBASIC13.71□□□□□ -0.21
Slc22a28B2RT89 Gm44367-201ENSMUST00000196836 138 ntBASIC13.71□□□□□ -0.21
Slc22a28B2RT89 Gm44350-201ENSMUST00000197197 138 ntBASIC13.71□□□□□ -0.21
Slc22a28B2RT89 Gm44390-201ENSMUST00000197533 144 ntBASIC13.71□□□□□ -0.21
Slc22a28B2RT89 Gm44313-201ENSMUST00000198018 138 ntBASIC13.71□□□□□ -0.21
Slc22a28B2RT89 Gm44486-201ENSMUST00000198508 138 ntBASIC13.71□□□□□ -0.21
Slc22a28B2RT89 Gm44314-201ENSMUST00000199263 138 ntBASIC13.71□□□□□ -0.21
Slc22a28B2RT89 Gm44394-201ENSMUST00000199558 138 ntBASIC13.71□□□□□ -0.21
Slc22a28B2RT89 Gm44484-201ENSMUST00000199873 138 ntBASIC13.71□□□□□ -0.21
Slc22a28B2RT89 Gm44466-201ENSMUST00000200264 138 ntBASIC13.71□□□□□ -0.21
Slc22a28B2RT89 Gm44359-201ENSMUST00000200671 138 ntBASIC13.71□□□□□ -0.21
Slc22a28B2RT89 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.71□□□□□ -0.21
Slc22a28B2RT89 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Slc22a28B2RT89 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Slc22a28B2RT89 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Slc22a28B2RT89 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Slc22a28B2RT89 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.71□□□□□ -0.22
Slc22a28B2RT89 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Slc22a28B2RT89 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Slc22a28B2RT89 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Slc22a28B2RT89 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Slc22a28B2RT89 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Slc22a28B2RT89 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Slc22a28B2RT89 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Slc22a28B2RT89 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Slc22a28B2RT89 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Slc22a28B2RT89 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Slc22a28B2RT89 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Slc22a28B2RT89 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.7□□□□□ -0.22
Slc22a28B2RT89 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Slc22a28B2RT89 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc22a28B2RT89 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Slc22a28B2RT89 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc22a28B2RT89 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms