Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Gm21769-201ENSMUST00000211922 111 ntBASIC7.68□□□□□ -1.18
Ubr4A2AN08 Gm10608-202ENSMUST00000213924 676 ntBASIC7.68□□□□□ -1.18
Ubr4A2AN08 AC132384.14-201ENSMUST00000219346 1147 ntBASIC7.68□□□□□ -1.18
Ubr4A2AN08 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC7.68□□□□□ -1.18
Ubr4A2AN08 CT010506.4-201ENSMUST00000225457 351 ntBASIC7.68□□□□□ -1.18
Ubr4A2AN08 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Gm7211-201ENSMUST00000172692 1118 ntBASIC7.68□□□□□ -1.18
Ubr4A2AN08 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Gm42511-201ENSMUST00000196160 234 ntBASIC7.68□□□□□ -1.18
Ubr4A2AN08 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Gm45751-201ENSMUST00000210185 1573 ntBASIC7.68□□□□□ -1.18
Ubr4A2AN08 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Gm23200-201ENSMUST00000104379 132 ntBASIC7.68□□□□□ -1.18
Ubr4A2AN08 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Gm1335-201ENSMUST00000121653 386 ntBASIC7.68□□□□□ -1.18
Ubr4A2AN08 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Gm6257-201ENSMUST00000163864 910 ntBASIC7.68□□□□□ -1.18
Ubr4A2AN08 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC7.68□□□□□ -1.18
Ubr4A2AN08 AC165260.3-201ENSMUST00000225101 665 ntBASIC7.68□□□□□ -1.18
Ubr4A2AN08 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ubr4A2AN08 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ubr4A2AN08 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC7.67□□□□□ -1.18
Ubr4A2AN08 Gm14277-201ENSMUST00000121195 360 ntBASIC7.67□□□□□ -1.18
Ubr4A2AN08 Gm27320-201ENSMUST00000184892 109 ntBASIC7.67□□□□□ -1.18
Ubr4A2AN08 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Ubr4A2AN08 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC7.67□□□□□ -1.18
Ubr4A2AN08 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC7.67□□□□□ -1.18
Ubr4A2AN08 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ubr4A2AN08 CU062626.3-201ENSMUST00000225522 1411 ntBASIC7.67□□□□□ -1.18
Ubr4A2AN08 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Tcf21-202ENSMUST00000218002 1788 ntBASIC7.67□□□□□ -1.18
Ubr4A2AN08 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC7.67□□□□□ -1.18
Ubr4A2AN08 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Gm6722-201ENSMUST00000221586 390 ntBASIC7.67□□□□□ -1.18
Ubr4A2AN08 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC7.67□□□□□ -1.18
Ubr4A2AN08 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC7.67□□□□□ -1.18
Ubr4A2AN08 Gm13612-201ENSMUST00000119276 390 ntBASIC7.67□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms