Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv29A0A0G2LB96 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Gm18489-201ENSMUST00000172565 551 ntBASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv29A0A0G2LB96 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trbv29A0A0G2LB96 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trbv29A0A0G2LB96 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Trbv29A0A0G2LB96 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trbv29A0A0G2LB96 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 Gm13836-201ENSMUST00000121159 501 ntBASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 Gm11780-201ENSMUST00000136880 516 ntBASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 Gm33142-201ENSMUST00000193913 867 ntBASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv29A0A0G2LB96 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms