Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trbv3A0A0A6YYE2 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv3A0A0A6YYE2 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Gm29361-201ENSMUST00000183323 2000 ntBASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Mir770-201ENSMUST00000103252 94 ntBASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms