Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Gm13418-201ENSMUST00000119097 944 ntBASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Gm44357-201ENSMUST00000195897 142 ntBASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Gm19658-201ENSMUST00000196231 138 ntBASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Gm44367-201ENSMUST00000196836 138 ntBASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Gm44350-201ENSMUST00000197197 138 ntBASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Gm44390-201ENSMUST00000197533 144 ntBASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Gm44313-201ENSMUST00000198018 138 ntBASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Gm44486-201ENSMUST00000198508 138 ntBASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Gm44314-201ENSMUST00000199263 138 ntBASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Gm44394-201ENSMUST00000199558 138 ntBASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Gm44484-201ENSMUST00000199873 138 ntBASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Gm44466-201ENSMUST00000200264 138 ntBASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Gm44359-201ENSMUST00000200671 138 ntBASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 AC159106.1-201ENSMUST00000224421 690 ntBASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav9d-1A0A075B699 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Spr-ps1-201ENSMUST00000089584 605 ntBASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-1A0A075B699 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9d-1A0A075B699 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9d-1A0A075B699 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav9d-1A0A075B699 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9d-1A0A075B699 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Trav9d-1A0A075B699 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav9d-1A0A075B699 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9d-1A0A075B699 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9d-1A0A075B699 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9d-1A0A075B699 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9d-1A0A075B699 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav9d-1A0A075B699 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms