Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gm10499-201ENSMUST00000174094 934 ntBASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gm23634-201ENSMUST00000175071 91 ntBASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.16□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gm43767-201ENSMUST00000198933 381 ntBASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.15□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav15-2-dv6-2A0A075B650 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms